Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-16 seq1 95.1 1e-13 >seq2 Length=3262383 Score = 104 bits (114), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||||||||| | ||||||||| |||||| || ||||| || ||||| || ||||| Sbjct 1222595 ATATTGTAATCTGAGAGAGTTCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTC 1222536 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||| || || ||||| |||||||| || || || || || ||||| || Sbjct 1222535 TGTTGATCAGGCGGGATACCTTCCTTATCTTGGATCTTGCTCTTAACAGCATCAATCGTG 1222476 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || | | ||| ||||| | || || || || | || |||||||| || || Sbjct 1222475 TC-GGACGACTCGACTTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTG 1222417 Query 563472 CATA 563475 |||| Sbjct 1222416 CATA 1222413 >seq1 Length=4947887 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 550320 CACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTG 550379 |||| ||| | || ||||| ||||| | | || |||| | | || || ||||| Sbjct 4392655 CACCCGAAGAGATCTCATCCATGGTCCTCCTCAAGATGAGAGAGACCGCAGAGGCTTTCC 4392714 Query 550380 TTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 | ||| ||| || | | | || || || ||||| || || || || || ||||| || | Sbjct 4392715 TCGGTGGAGATGTCAAGCAGGCCGTCATCACTGTCCCTGCCTACTTCAACGACTCCCAGC 4392774 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 |||||||||| || |||||||| | || || || | | ||||| ||||| ||||| | Sbjct 4392775 GTCAAGCTACCAAGGATGCTGGTCAGATCGCCGGCATGCAGGTTCTCCGTATCATCAACG 4392834 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | ||||| || ||||| | || || || || || || Sbjct 4392835 AGCCTACCGCCGCTGCTATCGCTTACGGTCTCGACAA 4392871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295418270390