Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 190 4e-43 seq7 156 8e-33 >seq6 Length=1963780 Score = 190 bits (210), Expect = 4e-43 Identities = 359/522 (69%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || || || |||| ||||||| | ||||||||| ||||||||||||| || | || Sbjct 1098656 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTTC 1098715 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || || ||||| || |||||||||||||||||||| || || ||||| Sbjct 1098716 TTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAG 1098775 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || | ||||||||||| | | | ||||||||||||||| | | ||||| || Sbjct 1098776 GCTACCAATCTCTCTCCGAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCG 1098835 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG-CTTCTTGCACTCACC 48390 ||||| |||||| |||||| ||||| ||||| ||| || | | || | || Sbjct 1098836 GCCTTGCGCTTGATAGCTGGCATGGTCTCGATGGCGTTGAATAGACGTGTT-CGCT---G 1098891 Query 48391 TGCG--TCCGC-AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 |||| | ||| | |||||| || || | ||| | || | ||| | || || Sbjct 1098892 TGCGGTTTCGCGGATGTAGGTATCGATGAGGAGGGAGTAGACTTCTGCGTGAATGTTTTC 1098951 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||||||| ||||||||| |||||| || ||||| ||||| || ||| Sbjct 1098952 AATCATGATCTGGAAGCCGTAGAAGCACCTGGCTTCGGCGACCTGGACTTCGCTGCTGAA 1099011 Query 48508 TCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 || ||| || || ||||| ||||| || || || | | ||| ||||| || || || || Sbjct 1099012 TCGCTCTAGAAGGTTCTCGTTGACGATACCGTCGGCGGAAGCGAAGAATGCGAGTACGTG 1099071 Query 48568 TTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCC 48624 | ||| || |||| | | |||| || |||| | || | ||| ||| Sbjct 1099072 AGAGATGAAGAATCGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGGTCCTTGGA 1099131 Query 48625 CAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 ||||| | || || | ||||||||||| || |||||| Sbjct 1099132 AAGGTCAATCTCCTCTGCGGTCCAGAAGGAAGCCTCTGCTTT 1099173 >seq7 Length=1769091 Score = 156 bits (172), Expect = 8e-33 Identities = 674/1048 (64%), Gaps = 52/1048 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || |||||||||| | | | || |||||||| || || |||||||| || ||||| Sbjct 965399 ACTGTAAACTGTATAGCGCCGACTGCTGCCTTGGTACGGAGGTAGTACATTCCAGTCTTG 965340 Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGG 212672 || ||||| |||||||| | |||||| | |||||||| ||| || || Sbjct 965339 AGACCCTTCTTCCAGCCGTAGAAGTGCATGGATGTGAGTTG----AGCGAAAGTG---GG 965287 Query 212673 TCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTG 212732 | || ||| || || | ||| |||||||| || || ||||| | | | ||| Sbjct 965286 TGAT-----TGG---AGGTGGATGTTAAGGGACTGTGATTGATCAATGAACGCGCCTCTG 965235 Query 212733 TCAGCGGCCATGTCTATGATATCTCT-CTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 || || | |||||| ||||| |||| ||| || |||||| || || | |||| | Sbjct 965234 TCTGCAGACATGTCGATGATG-CTCTTCTGACTGATCTCCCATACTGTGCGGTAGATAGC 965176 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAG 212848 |||| || ||||| | | || |||| || | ||| || ||| ||| | || Sbjct 965175 CTTGATCTCGTCTGGTAGGAAAGGAATGTGTTGGATAGAACCTTGGTGAGCAATGATGAG 965116 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA-- 212906 | | | | ||| || |||||| ||| | || | ||| | || | Sbjct 965115 ATTCTTGAG---GTCTTCATTCCAGTAGCC---GAGATCGACCAACTCGCGGAGAAGCCA 965062 Query 212907 -GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| |||||||| || || | | |||| | ||| | ||| || ||||| Sbjct 965061 TGGGTTGACAATCTGGAACTCGCCAGCCAAGACCCGTCGAGTGTAGATGTTGGAGGTGTA 965002 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || ||||||| || |||||||| | ||| || || |||||||| || Sbjct 965001 TGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTAGGCATGGGGGC 964942 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCT-CTGCCCAGT 213084 | ||||| ||| | | ||||| || | |||| | ||| | | | ||||||| Sbjct 964941 GAGGAGGAGCGAGTTGCGTAGACCGTGTTCTCTGATGTTG-GCCTTGGATGCAGCCCAGT 964883 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||||||| | || ||| ||| ||| | || ||||| ||| | | | Sbjct 964882 CCCATCTGTCGGA-AGGAGTGACTCC--------CCATAGATCGAACTG-AAGCTCGCCT 964833 Query 213145 TGCTCA-CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 || | | || ||| || |||| ||| | || | ||||| || || ||||| Sbjct 964832 TGAGAAGCTGGAGAGCCAGGGAAAGACTGATAGTGACCTTCTTCCTTTGCAAGTTCGCAA 964773 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG-GC 213262 || |||| || || |||| ||||||||| || || || ||| |||| || | | | || Sbjct 964772 GAGGCCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATGTCCTTGTTCAG-TCGTCGAGC 964714 Query 213263 CTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322 || ||| ||| ||||| | | ||| |||| || || || || || || Sbjct 964713 GTCAGGGCTGTCGAAAGGCATGCGAAGGGCCATGAAGGCATCTGCGAGACCTTGCACACC 964654 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381 ||| || || || | || | | ||| || || |||| ||||| | ||||||||||| Sbjct 964653 GATTCCAATAGGGCGATGACGGAAGTTCGAGTTCTGAGC-CTCCTTGACGGGGTAAAAGT 964595 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 || |||||||| |||||| | ||| | | | || |||||||| | | ||| | | Sbjct 964594 TGACGTCGATGACCTTGTTCAAGTTTCTTGCAACTACCTTGGTGACGTCGTGCAGCTTC- 964536 Query 213442 CGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501 | ||| |||| | ||||||| | || ||| || ||||| ||||| || Sbjct 964535 -----TGGAAGTTGTAGACACCGTCCTTAATGAAAGTAGGGAGAGCGATAGAGGCCAAGT 964481 Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561 |||| || || || || | || | | |||||| |||||||| ||||||| |||| | Sbjct 964480 TGCAGACAGCGACTTCATCAGGAGCAGAGTACTCGATGATCTCAGTGCACAAGTTGGAGT 964421 Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 ||| || || ||||||| ||||| Sbjct 964420 TCTTGATCGTTCCGAGGTTCTTCTGGTT 964393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532671914240