Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 179 7e-40 seq7 96.9 6e-15 >seq6 Length=1963780 Score = 179 bits (198), Expect = 7e-40 Identities = 354/510 (69%), Gaps = 19/510 (4%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTA 25566 ||||||||| || |||||||| || |||||||| | ||| |||| | |||| | Sbjct 1099156 CTGGACCGCAGAGGAGATTGACCTTTCCAAGGACCTCCACGACTGGGAGAACAAGCTCAA 1099097 Query 25567 TCCAAAGACGAGCAGCATTTTC-TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625 ||| ||||| | | | ||| || |||| | |||||||| || || | || || Sbjct 1099096 --CAAGGACGAAC-GATTCTTCATCTCTCACGTACTCGCATTCTTCGCTTCCGCCGACGG 1099040 Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 ||| || |||||||| || ||| |||||| ||| ||||| ||| || || |||| Sbjct 1099039 TATCGTCAACGAGAACCTTCTAGAGCGATTCAGCAGCGAAGTCCAGGTCGCCGAAGCCAG 1098980 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 ||| |||||||| |||||||| || ||||| | ||| | || || || || || Sbjct 1098979 GTGCTTCTACGGCTTCCAGATCATGATTGAAAACATTCACGCAGAAGTCTACTCCCTCCT 1098920 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| || ||||| || ||| || || || || || ||||||||| Sbjct 1098919 CATCGAT-ACCTACATCCGCGAAACCGCACAGCGAACACGTCTATTCAACGCCATCGAGA 1098861 Query 25805 ACATACCCAGC-ATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC 25863 ||| || ||| |||||| | ||||| ||||| |||| |||||| ||| || ||| Sbjct 1098860 CCATGCC-AGCTATCAAGCGCAAGGCCGAATGGGCAATGACATGGATCT-CAGACA-AGC 1098804 Query 25864 GCTACGT---TTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920 | ||| | || ||| | |||||||||| || ||||| ||||||||||| ||| Sbjct 1098803 AGT-CGTGCTTCGGAGAGAGATTGGTAGCCTTCGCCGCTGTAGAGGGCATCTTCTTCTCT 1098745 Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 ||||| || || |||||||||||||||||| || || |||||| || || ||| Sbjct 1098744 GGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTC 1098685 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 ||||| ||||||||| || | || |||||| Sbjct 1098684 TCCAATGAGCTCATCTGCCGTGATGAGGGT 1098655 >seq7 Length=1769091 Score = 96.9 bits (106), Expect = 6e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 ||||||||||| |||| || ||||||||||||||| ||||||| ||||| ||| || Sbjct 963785 CCGATACCACCAGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCA 963726 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430 || |||||||| || || | | | | || || || ||||||||||||| |||| | | Sbjct 963725 TCGATAGAGTCTTCTTTCATGGTGACGAGGAAGCACGACGACATCTGAGGGTTGGGAGTA 963666 Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | || || ||||| || || || || ||||| | | ||||||| Sbjct 963665 CCAGCTGCGAAAAGCGTAGGTGAAGCATGGGTGAAGTATCGCTCAGACATC 963615 Score = 89.7 bits (98), Expect = 1e-12 Identities = 263/395 (67%), Gaps = 13/395 (3%) Strand=Plus/Minus Query 221812 CTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCAC 221871 ||| || || || ||||||||||| ||||| ||||| || ||||| ||||||| | Sbjct 964334 CTTACGGTTCGCGGCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTC 964275 Query 221872 CAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCT 221930 || || | |||||| | |||| || | || ||| |||| ||||| | || Sbjct 964274 AAGGATAGCATACCAGAGCT-TCTGAGCCTTGACAGTCTTCTT---TGCACGTCCTTCCT 964219 Query 221931 TTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGAC 221990 | || ||| ||||| || || | || |||||| ||||| | ||| ||| Sbjct 964218 TCTCGTACTTCAAGAAGAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGT-TGGGT 964160 Query 221991 ACCT-GGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCC-TCTGCATGAAGAG 222048 | | ||| || || | ||| ||||| ||| || | || | ||| |||||| | Sbjct 964159 GCTTCGGCAGGGCAGAAGAGAGGCCAGTCACCGTTCTCCTCTACTCGTCT-CATGAACAT 964101 Query 222049 GTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCG--CTGCTCCTCCACGCCGTTG 222106 || |||||||| || || | |||||||| | | || || || || || ||| | Sbjct 964100 ATCGGGGATCCAGAGAGCGTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTAC--CGTGG 964043 Query 222107 TTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCC 222166 || || | || || | ||||| |||| || |||||||| ||||| | |||| ||| Sbjct 964042 TTCTTGCGGAGGTCGAGGAACTCGAAAACATCTGCGTGCCATGGCTCAATGTAGATGGCA 963983 Query 222167 AGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 | || || |||||||||||||| || ||||| || Sbjct 963982 AAGGCACCAGGTCGCTTGTTGCCTCCTTGATCGAC 963948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844672283840