Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 325 5e-84 seq2 145 1e-29 seq3 118 1e-21 seq5 104 3e-17 >seq1 Length=4947887 Score = 325 bits (360), Expect = 5e-84 Identities = 775/1170 (66%), Gaps = 15/1170 (1%) Strand=Plus/Plus Query 195580 TGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGA 195639 ||| ||||| | ||| | || || | | || |||||||| || | |||||||| Sbjct 4392605 TGACAAGCCCGTCATTGAGGTCGAGTACAAGGGCGAGAAGAAGACCTTCACACCCGAAGA 4392664 Query 195640 AATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAAC 195699 || || || ||||| | | ||||||| ||||| || || ||||| | ||| | Sbjct 4392665 GATCTCATCCATGGTCCTCCTCAAGATGAGAGAGACCGCAGAGGCTTTCCTCGGTGGAGA 4392724 Query 195700 TGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGAC 195759 ||| || | || || | ||||| ||||| ||||||| || || || || || || || Sbjct 4392725 TGTCAAGCAGGCCGTCATCACTGTCCCTGCCTACTTCAACGACTCCCAGCGTCAAGCTAC 4392784 Query 195760 AAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGC 195819 ||||| |||| | || || || | | ||| | || ||||| || || || || Sbjct 4392785 CAAGGATGCTGGTCAGATCGCCGGCATGCAGGTTCTCCGTATCATCAACGAGCCTACCGC 4392844 Query 195820 GGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAA------GATAAAAATGTATT 195873 ||||| || ||||| ||||| |||||||| || || || || || || | Sbjct 4392845 CGCTGCTATCGCTTACGGTCTCGACAAGAA---GGGCGCTTCTGGCGAGAAGAACGTTCT 4392901 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 ||||| ||||||||||||||||| || ||||| || || |||| ||| || | ||||| Sbjct 4392902 CATCTTCGATCTCGGTGGTGGTACATTCGATGTATCTCTCCTCACTATCGAGGAGGGTAT 4392961 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG 195993 ||||| || |||||||| |||||||| || || | || || || |||||||| | Sbjct 4392962 CTTCGAGGTCAAGGCTACCGCTGGTGACACCCACTTGGGAGGAGAGGATTTCGACAACAG 4393021 Query 195994 TCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAA 196053 || || || || || | |||||| |||||||| ||||| ||| | | ||||| Sbjct 4393022 ACTAGTCAACCACTTCACTCAGGAGTTCAAGCGAAAGAACAAGAAGGATCTCGCCGGAAA 4393081 Query 196054 TCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTC 196113 || | || || | || || | |||||||| || || || || ||||| || || || Sbjct 4393082 CGCTCGTGCCCTCAGACGTCTCCGCACTGCATGCGAGCGAGCAAAGCGAACCCTTTCCTC 4393141 Query 196114 TACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAAC 196173 | || || || | | |||||||| || | | || || || ||||| || || | Sbjct 4393142 CGCCGCCCAGACCACCATCGAGATTGACTCTCTTTACGAGGGCATCGACTTTTACACCTC 4393201 Query 196174 TATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACC 196233 || || ||||| | || || ||| | | ||| | || || ||||| || Sbjct 4393202 CATCACTCGTGCTAGATTCGAGGAGCTGTGCCAGGATCTCTTCAGATCCACCATGGACCC 4393261 Query 196234 TGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCT 196293 || || | || || || ||| | ||||| || |||||| || | || |||||||| Sbjct 4393262 AGTCGAGAAGGTCCTCCGCGACTCCAAGATCGACAAGTCTTCCGTACACGAGATTGTCCT 4393321 Query 196294 TGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAA 196353 ||| || ||||| |||||||| || | |||| || | | || ||||||||| Sbjct 4393322 TGTCGGTGGATCCACCCGTATCCCCAGAGTTCAGAAGCTCGTCTCCGACTTCTTCAACGG 4393381 Query 196354 TAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCA 196413 || || |||||| | |||||||| ||||| || || || || ||||| ||||| || Sbjct 4393382 CAAGGAGCCCAACAAATCTATCAACCCCGATGAGGCCGTAGCCTACGGTGCCGCCGTCCA 4393441 Query 196414 GGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGATCTTCTGCTACTTGA 196470 |||||| || || | || ||||| | | || ||| ||||| || || || || Sbjct 4393442 GGCTGCCATCCTTACCGG---TGACACTTCCGAGAAGACCCAGGATCTCCTCCTCCTCGA 4393498 Query 196471 TGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGA 196530 ||| || || | ||||| || |||| || || || ||||| | ||| | || | Sbjct 4393499 TGTCGCCCCTCTCTCCCTCGGAATTGAGACTGCCGGAGGTGTCTTCACTCCCCTCATCAA 4393558 Query 196531 TAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA 196590 | |||||||| | || || |||||| | |||| || || || | || || || Sbjct 4393559 GCGAAACACAACCGTACCAACCAAGAAGTCCGAGATCTTCTCCACCTACGCAGACAACCA 4393618 Query 196591 ACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCT 196650 |||||||| | || || || | || |||||||| | || | ||||| ||| | || Sbjct 4393619 GCCAGGTGTACTCATCCAGGTCTTCGAGGGAGAACGTGCACGAACCAAGGACAACAACCT 4393678 Query 196651 ACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || |||| ||||| | | || || || |||| || | ||||| || || | | Sbjct 4393679 TCTCGGAAAGTTCGAGCTCTCTGGTATCCCTCCTGCTCCTCGTGGTGTACCTCAAGTCGA 4393738 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAAT 196740 || ||||||| | || || || || || Sbjct 4393739 GGTCACCTTCGATGTCGATGCTAACGGTAT 4393768 Score = 122 bits (134), Expect = 1e-22 Identities = 183/256 (71%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 195733 CTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTG 195792 ||||| || | |||||||| || || || ||||| | | ||||| ||||| ||| Sbjct 781016 CTTCAACGACGCTCAACGACAAGCCACCAAAGACGCCGGCACCATTGCCGGTCTTAACGT 781075 Query 195793 TCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAA 195852 |||| |||| |||| || || || || || || || ||||||||||| |||| | | Sbjct 781076 TCTTCGAATCGTCAACGAGCCCACGGCCGCCGCCATCGCTTATGGTCTTAACAA-ATCTG 781134 Query 195853 GGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACT 195912 | | || | || || | ||| ||||||||||||||||| ||||||||||| || Sbjct 781135 GTCCCGAGCGCCAGATC-ATCG-TCTACGATCTCGGTGGTGGTACTTTTGATGTCTCTCT 781192 Query 195913 TCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGG 195972 || |||||| ||| | ||||||||| |||||| || || ||||| ||||| || Sbjct 781193 CCTTTCGGTTGAAGAAGGTGTTTTCGAAGTACTGGCTACGGCGGGAGATACGCATCTCGG 781252 Query 195973 TGGTGAAGATTTCGAT 195988 || || || |||||| Sbjct 781253 AGGAGAGGACTTCGAT 781268 >seq2 Length=3262383 Score = 145 bits (160), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || | || ||||| || ||||| || || || ||||||| Sbjct 1222412 GTATGCAGATCTTCGTTAAGACGTTGACGGGAAAGACCATCACTCTGGAAGTCGAGTCGT 1222471 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| || ||| | || |||||| |||||||||||||| || || || |||| Sbjct 1222472 CCGACACGATTGATGCTGTTAAGAGCAAGATCCAAGATAAGGAAGGTATCCCGCCTGATC 1222531 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || |||| || ||||| ||||||||||| ||||||||| | || ||| | ||||||| Sbjct 1222532 AACAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGAAGAACTCTCTCAGATTACA 1222591 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCT 172079 | | || |||||| || || ||| | || || || || Sbjct 1222592 ATATCCAGAAGGAGAGCACGCTCCACTTGGTCCTCAGACT 1222631 Score = 140 bits (154), Expect = 4e-28 Identities = 297/436 (68%), Gaps = 13/436 (3%) Strand=Plus/Plus Query 195689 ATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAA 195748 || || || || || || | || ||||| || |||||||| ||||||| || || || Sbjct 1668524 ATCGGCAAGACCGTTAAGAAGGCCGTTGTCACCGTACCTGCCTACTTCAACGACTCCCAG 1668583 Query 195749 CGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAA 195807 || | | || ||||| || | | | || || ||||| | |||| | | || ||||| Sbjct 1668584 CGTCTTTCCACCAAGGATGCCGGTACCATCGCTGGTCTGGA-TGTCCTCCGTATCATCAA 1668642 Query 195808 TGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA------CAAGAACAAGGAC--GAA 195859 || || || || || || || ||||| ||||| || ||| |||||||| ||| Sbjct 1668643 CGAGCCTACCGCCGCCGCCATCGCTTACGGTCTCGATGCCGCCAACGACAAGGACAAGAA 1668702 Query 195860 G-ATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAA 195918 | | | || | || || ||||||||||||||||| || |||||||| ||||| | Sbjct 1668703 GGAGCGCACCGTTCTCATTTTCGATCTCGGTGGTGGTACTTTCGATGTCTCCCTTCTTAC 1668762 Query 195919 TATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGA 195978 || || ||| | |||| || |||||||| |||||||| ||||| | || || || Sbjct 1668763 CATCACTGGAGGTGTCTTCGCCGTCAAGGCTACCGCTGGTGACACTCACTTGGGAGGAGA 1668822 Query 195979 AGATTTCGATGCACG-TCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGA 196037 || ||||| ||| || ||| || || | ||||||| | ||| | ||| Sbjct 1668823 GGACTTCGA-CAACGCCCTGCTCGAGCACTTCAAGGCTGAGTTCAAGAGGAAGCACAAGC 1668881 Query 196038 AAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCA 196097 | ||||| || || | | ||||| ||||| || || | ||||| || ||||| | Sbjct 1668882 AGGATATCGAAGGTGATGCCCGTGCTCTGCGTCGTCTGAGATCAGCATGCGAGCGTGCAA 1668941 Query 196098 AACGAACTCTCTCTTC 196113 | |||||||||||||| Sbjct 1668942 AGCGAACTCTCTCTTC 1668957 >seq3 Length=2343223 Score = 118 bits (130), Expect = 1e-21 Identities = 226/328 (69%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 198447 CGATTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGAT 198506 || ||||||||||| | ||||| || ||| ||||| ||| || |||| |||| | Sbjct 750201 CGCTTCAAGGATGTCGCAGGTATGGATGAAGCAAAGGAAGAGATCATGGAGTTTGTCAAG 750142 Query 198507 TTTCTTAAAAACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTT 198566 || ||| || | || | |||||| | | || ||| ||||| ||||| || | Sbjct 750141 TTCCTTCAAGAGCCTAAGAAGTACCAACGTCTAGGAGCCAAGATCCCTCGTGGCGCCATC 750082 Query 198567 CTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCG 198626 || | ||| | || || || ||||||||||| || || |||| || ||||| || Sbjct 750081 ATCTCTGGTCCTCCTGGAACCGGTAAAACCCTACTTGCAAAAGCTACAGCTGGTGAGGCG 750022 Query 198627 AGTGTCCCCTTTC-TTCAGTGCTCCGCGGC-GAGTTTCATCGAGATGTTCGTTGGTGTTG 198684 |||| ||||| | ||| || || | | | ||| ||| ||||||||||||||||||| | Sbjct 750021 GGTGTTCCCTTCCTTTCTGT-ATCTGGGTCAGAG-TTCGTCGAGATGTTCGTTGGTGTCG 749964 Query 198685 GTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCT 198744 || || || || || || || || | ||| | || ||| | |||||||| Sbjct 749963 GTTCTTCCCGAGTTCGTGATCTATTCGCTACGGCAAAGAAGAACGCACCTTCTATCATCT 749904 Query 198745 TCATTGATGAGATTGACGCTGTTGGTAA 198772 |||| |||||||| |||||| | ||||| Sbjct 749903 TCATCGATGAGATCGACGCTATCGGTAA 749876 >seq5 Length=2034464 Score = 104 bits (114), Expect = 3e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 171965 GCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTA 172024 |||| |||||||| || || || || || || ||||| |||||||| || |||||||| | Sbjct 467863 GCATCCCACCCGACCAACAGCGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGACGAA 467804 Query 172025 CCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGG 172084 ||||| | || |||||| | || ||||||||||| ||||| | || || | || || | Sbjct 467803 CCCTCTCCGACTACAACATCCAGAAGGAGTCTACCTTACACTTGGTACTCCGTCTGCGAG 467744 Query 172085 GTGGTGC 172091 ||||||| Sbjct 467743 GTGGTGC 467737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862309543920