Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2 104 4e-17 >seq2 Length=3262383 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| || || || | ||||| ||| || | ||||| || ||||| || | |||| Sbjct 1222595 ATATTGTAATCTGAGAGAGTTCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTC 1222536 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||||||||| || || ||||| |||||||| || ||| | || | | ||| || Sbjct 1222535 TGTTGATCAGGCGGGATACCTTCCTTATCTTGGATCTTGCTCTTAACAGCATCAATCGTG 1222476 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| ||||| ||||| ||||| || || || || || | ||| || || || || ||| Sbjct 1222475 TCGGACGACTCGACTTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGC 1222416 Query 193359 AT 193360 || Sbjct 1222415 AT 1222414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654276297520