Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 1e-14 seq7 87.8 2e-11 >seq6 Length=1963780 Score = 98.7 bits (108), Expect = 1e-14 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 868726 GTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTA 868785 ||| |||||||| ||||||| |||| |||||| | ||| || || | | ||| Sbjct 1098299 GTTTGTCTTGCCGGCGAGCGAAATCATCTCCATGAAGTCGAAAGGATTCGCGGAACCGTA 1098358 Query 868786 GTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCA 868845 |||||| ||| || || | | || || | ||| || || ||||||||||||||||| Sbjct 1098359 GTGCTTCTCGTTACCCAGTGCTACTAGTAGTCTGTCTGCTACGAACTCGATGTACTGGCA 1098418 Query 868846 CATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTT 868905 ||| | | ||||||||||||||||| || || || | ||| | ||||| || Sbjct 1098419 CATCTGCTCTGCGTTCATGCCGATGAGGCGGACGGGGAGGGCGTCGGAGAGGAACTCCTT 1098478 Query 868906 CTCGATCTCGACGGCCTCGACGATGAT 868932 ||| |||||||| || | | |||||| Sbjct 1098479 CTCAATCTCGACAGCTTGCAGGATGAT 1098505 Score = 89.7 bits (98), Expect = 6e-12 Identities = 196/288 (68%), Gaps = 13/288 (5%) Strand=Plus/Plus Query 869176 CGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCG 869235 || ||| || || || | ||| | || ||| |||| || || |||||||| || || Sbjct 1098652 CGTACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACG 1098711 Query 869236 CTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295 |||||||||||| ||||||||| ||| || ||||| ||||||||||| || ||||| Sbjct 1098712 CTTCTTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGC 1098771 Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCAT 869352 ||| | | | | ||| | ||| ||| || ||||| |||||| |||| Sbjct 1098772 GAAGGCTACCAATCTCTCTCCGAAG--CACGA----CTGCTTGTCTGAGATCCATGTCAT 1098825 Query 869353 CGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAA-AGAGGTGG 869410 ||||| |||||||| | | | | |||| || ||||||||| ||| ||| ||| Sbjct 1098826 TGCCCATTCGGCCTTGCGCTTGATAGCTGGCATGGTCTCGATGGCGTTGAATAGACGTGT 1098885 Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAG 869458 || | | || | || || ||||| ||||| ||||| || ||| Sbjct 1098886 TCGCTGT--GCGGTTTCGCGGATGTAGGTATCGATGAGGAGGGAGTAG 1098931 >seq7 Length=1769091 Score = 87.8 bits (96), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| ||||| || ||| || || || ||||||||||| || Sbjct 964092 TCCAGAGAGCGTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGA 964033 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| || || |||||||| ||||| | |||| ||||||||| || Sbjct 964032 GGTCGAGGAACTCGAAAACATCTGCGTGCCATGGCTCAATGTAGATGGCAAAGGCACCAG 963973 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 963972 GTCGCTTGTTGCCTCC 963957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138297288487