Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq7 89.7 5e-13 >seq2 Length=3262383 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| ||| | || || || || || || || ||||| || | || Sbjct 1222414 ATGCAGATCTTCGTTAAGACGTTGACGGGAAAGACCATCACTCTGGAAGTCGAGTCGTCC 1222473 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || ||||| || || || |||||| Sbjct 1222474 GACACGATTGATGCTGTTAAGAGCAAGATCCAAGATAAGGAAGGTATCCCGCCTGATCAA 1222533 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || ||||||||||| ||| |||| | |||||||| || Sbjct 1222534 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGAAGAACTCTCTCAGATTACAAT 1222593 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || |||||||| Sbjct 1222594 ATCCAGAAGGAGAGCACGCTCCACTTGGT 1222622 >seq7 Length=1769091 Score = 89.7 bits (98), Expect = 5e-13 Identities = 215/323 (67%), Gaps = 17/323 (5%) Strand=Plus/Minus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 ||||||||| | |||| || |||||| || ||||| | || | || | | | Sbjct 964217 CTCGTACTTCAAGAAGAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGC 964158 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 | | |||| || | ||| | ||| | |||||| ||| || || |||||||||| ||| Sbjct 964157 TTCGGCAGGGCAGAAGAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATC 964098 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATG 139476 || ||||| | |||| | | | |||||| || |||||| | | ||| || Sbjct 964097 GGGGATCCAGAGAGCGTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCG------TG 964044 Query 139477 TTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGG 139534 | | || | | || ||||| || ||||| || ||||||||||| || | ||||||| Sbjct 964043 GTTC-TTGCGGAGGTCGAGGAACTCGAAAACATCTGCGTGCCATGGCTCAATGTAGATGG 963985 Query 139535 CCATTGCGCC---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATA 139591 | | || || | | ||||| ||||||||||||| ||| | | |||||| | | Sbjct 963984 CAAAGGCACCAGGTCGCTTGTTGCCTCCTTGATCGACGTATCGAGCGGTGTTATTGTAGA 963925 Query 139592 CGCGCAACATCGGCTCCAGACCG 139614 | || | ||| ||| | | |||| Sbjct 963924 CTCGGAGCATGGGCACGATACCG 963902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897538139080