Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 >seq5 Length=2034464 Score = 140 bits (154), Expect = 3e-28 Identities = 257/371 (69%), Gaps = 7/371 (2%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGT-GATA 34262 |||||||| ||| ||||| || ||||||| ||| | || || | | | | ||| Sbjct 1758274 GGCGGGTTCCGCAGGATGAACGTAGTGAGCTTGTGCTTCATGTCTA-CATCCTGGCGATG 1758216 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 || || ||||||||| | | | || |||| ||| || | | || ||| || || Sbjct 1758215 TCCACAGGCTTTGCAGTCTCTATAAATCATGTCCTTCTTGTTG---ATGAAGAGGTCTGT 1758159 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA-ACCATCAAGCAGGT 34381 ||| || || | ||| | || || | || || || |||||| || ||||| || | Sbjct 1758158 CTCGGGATTCTTGCATCCAGGGCAGAGTACGAATTTATCGATGAAGACGGTCAAG-AGCT 1758100 Query 34382 CCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGA 34441 | | ||| | | ||||| | ||||||||||||| |||| ||||| || | || | Sbjct 1758099 CGCGCAACCTGGTTGCATCGTGAGCGCCGTTGACGATGTATCGCTCGTTCTTCTCGTCAA 1758040 Query 34442 CCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTC 34501 |||||||| || || ||||| || ||| | || || ||||| ||| ||| || Sbjct 1758039 AGGTGGTTTGCGCACCGAGTTCGCAGCCAAAGAATTTGGTAGGGTAGGTGGGCGGTCGGG 1757980 Query 34502 CAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTC 34561 | ||||| |||||||| ||| ||||||| |||||| |||||||||||||| ||||||| Sbjct 1757979 CGAGCGCTTTGGCGATGTCGACCATGTTGGGGATGACTGTCTTGATGCCGTTTCCCTTTC 1757920 Query 34562 CTTCGACCTTG 34572 | || || ||| Sbjct 1757919 CCTCTACTTTG 1757909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841544653423