Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 149 9e-30 >seq6 Length=1963780 Score = 149 bits (164), Expect = 9e-30 Identities = 333/491 (68%), Gaps = 17/491 (3%) Strand=Plus/Minus Query 1455795 AAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCAC 1455854 || || ||||| ||||| |||||||| |||||| | ||||| | ||| | || Sbjct 1099173 AAAGCAGAGGCTTCCTTCTGGACCGCAGAGGAGATTGACCTTTCCAAGGACCTCCACGAC 1099114 Query 1455855 TGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTT 1455911 |||| | ||| | | | ||||| || |||||| ||||| ||||| || || Sbjct 1099113 TGGGAGAACAAGCTCAACAAGGACGAACGATTCTTCATCTCTCACGTACTCGCATTCTT- 1099055 Query 1455912 CGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCA 1455971 ||| || ||| || ||||| ||||||||| | || || | | || ||||| Sbjct 1099054 CGCTTCCGCCGACGGTATCGTCAACGAGAACCTTCTAGAGCGATTCAGCAGCGAAGTCCA 1098995 Query 1455972 ATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGA 1456031 | | || || | | || ||||| ||||||||| || |||||||| ||| | || Sbjct 1098994 GGTCGCCGAAGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATTCACGCAGA 1098935 Query 1456032 AACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCT- 1456090 | |||||| ||||| ||||| |||||| || || | | || || ||| ||| Sbjct 1098934 AGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGC--GAACACGTCTA 1098877 Query 1456091 TTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGG 1456149 ||| ||||||||| || |||| | | | | |||||||| ||||| |||| ||| Sbjct 1098876 TTCAACGCCATCGAGACCATGCCAGCTATCAAGCGCAAGGCCGAATGGGCAATGACATGG 1098817 Query 1456150 ATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCG 1456205 ||| ||||| || ||| ||| | ||| | | || | ||| ||||| || | Sbjct 1098816 ATCTCAGACAAGCAG----TCGTG-CTTCGGAGAGAGATTGGTAGCCTTCGCCGCTGTAG 1098762 Query 1456206 AGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCA 1456265 |||||||||| ||||| || ||| ||||||||| |||||||||||||| || |||| Sbjct 1098761 AGGGCATCTTCTTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCA 1098702 Query 1456266 TGCCCGGTCTT 1456276 |||| |||||| Sbjct 1098701 TGCCTGGTCTT 1098691 Score = 98.7 bits (108), Expect = 1e-14 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| | | || |||||||| ||||| ||||| || ||| | || || || Sbjct 1098505 ATCATCCTGCAAGCTGTCGAGATTGAGAAGGAGTTCCTCTCCGACGCCCTCCCCGTCCGC 1098446 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 |||||||||||||||| || || |||||||||||||| | | || || || ||| | | Sbjct 1098445 CTCATCGGCATGAACG-CAGAGCAGATGTGCCAGTACATCG-AGTTCGTAGCAGACAGAC 1098388 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || || || | |||||||||||| | | || || || ||| | ||| Sbjct 1098387 TACTAGTAGCACT-GGGTAACGAGAAGCACTACGGTTCCGCGAATCCTTTCGACTTCATG 1098329 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAAC 1456732 ||| |||| ||||||| |||||||| ||| Sbjct 1098328 GAGATGATTTCGCTCGCCGGCAAGACAAAC 1098299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810139029782