Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=3262383 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| |||| | || | ||| |||||| ||||| || || ||||| || | Sbjct 1222640 CCTCCTCTTAGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAG 1222581 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | | | || || |||||||| || ||||| || | | ||| ||||| ||||| Sbjct 1222580 AGAGTTCTTCCA-TCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGG 1222522 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || || || || || | ||||||||||| || || Sbjct 1222521 GATACCTTCCTTATCTTGGATCTTGCTCTTAACAGCATCAATCGTGTCGGACGACTCGAC 1222462 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || || || |||||||| || ||||| Sbjct 1222461 TTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398330507720