Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7 105 8e-18 seq6 96.9 4e-15 seq2 82.4 1e-10 >seq7 Length=1769091 Score = 105 bits (116), Expect = 8e-18 Identities = 226/335 (67%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 || |||||||| |||||| |||| | || ||||| ||||| | | || ||||| | | Sbjct 964321 GCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATAC 964262 Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 || | | || | | || | ||| | || || ||||| ||| ||||||||| | | Sbjct 964261 CAGAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCACGTCCTTCCTTCTCGTACTTCAAGAA 964203 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 ||| | || || || || || | | |||| ||| ||||| | | | || ||||| Sbjct 964202 GAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGCTTCGGCAGGGCAGAA 964143 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594 |||| ||| | ||| ||||| || || ||||||| | || || ||||| || | Sbjct 964142 GAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGGATCCAGAGAGC 964083 Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654 | |||||||| | | || | ||||| | ||| ||||| || | || ||||| Sbjct 964082 GTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGAGGTCGAGGAA 964023 Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 ||| | | ||| |||||||||||||||| |||| Sbjct 964022 CTCGAAAACATCTGCGTGCCATGGCTCAATGTAGA 963988 >seq6 Length=1963780 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||||||||| ||| | || || ||||| |||||| ||||| ||||||||||| ||||| Sbjct 1098655 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTT 1098714 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 1098715 CTTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 1098774 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA-AACCATTTCATTGCCCATT 122854 || | | | || ||||| | ||| ||| | | | |||| |||||||||||| Sbjct 1098775 GGCTACCAATCTCTCTCCGAAGCA-CGACTGCTTGTCTGAGATCCATGTCATTGCCCATT 1098833 Query 122855 TCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATA 122899 ||||| || ||| ||| | || | |||||| | |||| Sbjct 1098834 CGGCCTTGCGCTTGATAGCTGGCATGGTCTCGATGGCGTTGAATA 1098878 >seq2 Length=3262383 Score = 82.4 bits (90), Expect = 1e-10 Identities = 96/129 (74%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 181613 ATAGCA--ACTGAAACCCGTACCGATACCCTCGGTTCCATTCACGAGAACCATTGGTAAA 181670 |||||| ||| |||| ||||||||||| || | |||||| ||||| ||||| || | | Sbjct 2356415 ATAGCAGAACTCCAACCGGTACCGATACCATCTGATCCATTGACGAGCACCATAGGCATA 2356356 Query 181671 GTTGGCATGTAAAAGTCTGGTTCAATGGAGCGTCCATCATCGTCCAAGTAGTTGAGGATC 181730 | |||||||| ||| ||||| ||| |||| ||||||| || |||| | | ||| Sbjct 2356355 ATAGGCATGTACCAGTTCGGTTCGATGCTTTGTCCGTCATCGTTCAGGTAGGTCAAGATA 2356296 Query 181731 GGGTCATCC 181739 | |||||| Sbjct 2356295 GCATCATCC 2356287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031913645600