Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6 109 7e-19 seq7 107 2e-18 >seq6 Length=1963780 Score = 109 bits (120), Expect = 7e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 130033 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 130092 |||||| |||||| ||||||| ||||| |||||| ||||| ||||||||||| ||||| Sbjct 1098655 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTT 1098714 Query 130093 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152 ||| | |||||| || || || || |||||||||||||| ||||| ||| ||||| Sbjct 1098715 CTTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 1098774 Query 130153 CGC 130155 || Sbjct 1098775 GGC 1098777 >seq7 Length=1769091 Score = 107 bits (118), Expect = 2e-18 Identities = 225/333 (68%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || ||||||||||||||| | || | || ||||| || || | || || ||||| | | Sbjct 964321 GCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATAC 964262 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 |||| | || | || | ||||| || || || || || | ||||||||| | | Sbjct 964261 CAGAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCACGTCCTTCCTTCTCGTACTTCAAGAA 964203 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 ||| | || || || || || |||| | ||| ||||| | | |||||||| Sbjct 964202 GAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGCTTCGGCAGGGCAGAA 964143 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||||| ||| | ||| |||||| || || ||||||| | || ||||||||||| || Sbjct 964142 GAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGGATCCAGAGAGC 964083 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||||||||| ||| ||| ||||||| | || || || || | || | || Sbjct 964082 GTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGAGGTCGAGGAA 964023 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTA 119161 || | | ||| |||||||| || || | ||| Sbjct 964022 CTCGAAAACATCTGCGTGCCATGGCTCAATGTA 963990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435114965160