Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7 132 6e-26 seq6 120 4e-22 >seq7 Length=1769091 Score = 132 bits (146), Expect = 6e-26 Identities = 235/338 (70%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 |||| |||||||||||||||| ||| | | |||||||| || | || ||||| | Sbjct 963988 TCTACATTGAGCCATGGCACGCAGATGTTTTCGAGTTCCTCGACCTCCGCAAGAACCACG 964047 Query 104676 GTGACGAGGAGG--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 || | || || | |||| | ||||||||||||| |||||||||||| || ||| | || Sbjct 964048 GTAAAGAAGAAGTCCGCGCT--CGCGATCTCTTCTACGCTCTCTGGATCCCCGATATGTT 964105 Query 104734 CATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGG 104793 ||||| |||| ||||||| || | ||| ||||||| || || | | | ||||| Sbjct 964106 CATGAGACGAGTAGAGGAGAACGGTGACTGGCCTCTCTTCTGCCCTGCCGAAGCACCCAA 964165 Query 104794 TCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG 104853 ||| |||| | || || || || || | || | | ||||||||| | ||||| Sbjct 964166 CCTCGCCGAGGTGTACGGAGATGAATTCGATGAGCTCTTCTTGAAGTACGAGAAGGAAGG 964225 Query 104854 TCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 104912 || || | ||| || | || | || | | ||| | ||||| || || |||| | Sbjct 964226 ACGTGCAAAGAAGACTGT-CAAGGCTCAGAAGCTCTGGTATGCTATCCTTGAGGCTCAGA 964284 Query 104913 CCGAGACTGGTACACCATACATGCTTTACAAAGACGCC 104950 | ||||| || | || | |||||||||||| |||||| Sbjct 964285 CTGAGACCGGAAACCCCTTCATGCTTTACAAGGACGCC 964322 Score = 105 bits (116), Expect = 8e-18 Identities = 525/819 (64%), Gaps = 24/819 (3%) Strand=Plus/Plus Query 105173 AATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 105232 || ||||||||||| || |||| || || || | | || || || ||||| || Sbjct 964594 AACTTTTACCCCGTCAAGGAGGCTCAGAACTCGAACTTCCGTCATCGCCCTATTGGAATC 964653 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATTCCGACGA 105291 ||||| || |||||||| |||| ||||| |||| | || ||| || | || Sbjct 964654 GGTGTGCAAGGTCTCGCAGATGCCTTCATGGCCCTTCGC-ATGCCTTTCGACAGCCCTGA 964712 Query 105292 AGC--GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349 || || | | | || | ||| || |||||||| || ||||||||||| ||||| Sbjct 964713 CGCTCGACG--ACTGAACAAGGACATCTTCGAGACCATCTACCACGCCGCTCTCGAGGCC 964770 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 || || | ||| ||| || |||| ||| | | || || ||||||||||| Sbjct 964771 TCTTGCGAACTTGCAAAGGAAGAAGGTCACTATCAGTCTTTCCCTGGCTCTCCAGCTTCT 964830 Query 105410 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGA 105468 ||||| | |||||| || ||| | |||| | || | || | || | ||||||| Sbjct 964831 CAAGGCGAGCTTCAGTTCGATCTATGGGGA-GTCACTCCTTCCGACAGATGGGACTGGGC 964889 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||| ||||| || | ||||| || ||| |||||| | || || || Sbjct 964890 TGCATCCAAGGCCAACATCAGAGAACACGGTCTACGCAACTCGCTCCTCCTCGCCCCCAT 964949 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 ||| || || |||||| | || || | || || || ||||| || || ||||| | Sbjct 964950 GCCTACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCTTCGAGCCATACACCTC 965009 Query 105589 GAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC---AAGCATCT 105645 |||||||| || | | | || || ||||| |||||||||| || ||| Sbjct 965010 CAACATCTACACTCGACGGGTCTTGGCTGGCGAGTTCCAGATTGTCAACCCATGGCTTCT 965069 Query 105646 CGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAA 105705 | || || || | || |||| | || | ||| ||||||| | Sbjct 965070 CCGCGAGTTGGTC---GATCTCGGCTACTGGAATGAAGACCTCAAGAATCTCATCATTGC 965126 Query 105706 AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCG 105765 ||||| || ||| | ||| | ||| | || || ||| | ||||| Sbjct 965127 TCACCAAGGTTCTATCCAACACATTCCTTTCCTACCAGACGAGATCAAGGCTATCTACCG 965186 Query 105766 CACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGC-T 105824 |||||| ||||| |||| |||| |||| |||||| | ||||| | || ||| | Sbjct 965187 CACAGTATGGGAGATCAGTCAGAAGAGCATCATCGACATGTCTGCAGACAGAGG-CGCGT 965245 Query 105825 TCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCT 105882 ||||||||||| ||| ||| | || || | | || || || | | | || Sbjct 965246 TCATTGATCAA--TCACAGTCCCTTAACATCCACCTCCAATCACCCACTTTCGCTCAACT 965303 Query 105883 CTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 | | || |||||| | ||| | ||||||||||||||||| || || ||||| |||||||| Sbjct 965304 CACATCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACTGGAATGTACTACCTCCG 965363 Query 105943 ATCTAAGGCA-AAGGCGCGCCCAATTCAGTT--CAGTCT 105978 | |||||| || || || | || ||||| |||||| Sbjct 965364 TACCAAGGCAGCAGTCG-GCGCTATACAGTTTACAGTCT 965401 >seq6 Length=1963780 Score = 120 bits (132), Expect = 4e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886 ||| ||||| ||||||||||||||||||||| ||| || | |||||||||||||| || Sbjct 1098766 TGTAGAGGGCATCTTCTTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGG 1098707 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||||||| ||||| ||||||||| ||||| |||| ||||| ||||| Sbjct 1098706 TCTCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGG 1098656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260719801640