Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 152 2e-31 seq3 87.8 5e-12 >seq1 Length=4947887 Score = 152 bits (168), Expect = 2e-31 Identities = 742/1176 (63%), Gaps = 17/1176 (1%) Strand=Plus/Plus Query 349478 GGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAA 349537 ||||| || || | |||||||| || || || || || | || || ||||||| Sbjct 4392603 GGTGACAAGCCCGTCATTGAGGTCGAGTACAAGGGCGAGAAGAAGACCTTCACACCCGAA 4392662 Query 349538 GAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAA 349597 || || ||||| ||||| | | || |||| || | || || || | | |||| | Sbjct 4392663 GAGATCTCATCCATGGTCCTCCTCAAGATGAGAGAGACCGCAGAGGCTTTCCTCGGTGGA 4392722 Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || | | || || || ||||| || ||||| || || || |||||||| || Sbjct 4392723 GATGTCAAGCAGGCCGTCATCACTGTCCCTGCCTACTTCAACGACTCCCAGCGTCAAGCT 4392782 Query 349658 ACAAAAGATGCTGG-CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCAC 349716 || || |||||||| ||| || || || | | ||||| | || || || || || || Sbjct 4392783 ACCAAGGATGCTGGTCAG-ATCGCCGGCATGCAGGTTCTCCGTATCATCAACGAGCCTAC 4392841 Query 349717 TGCTGCAGCAATTGCATATGGGCTTGATAAAATGAG------TGACCAAGaaaaaaaTAT 349770 || || || || || || || || || || | | | || | || || || | Sbjct 4392842 CGCCGCTGCTATCGCTTACGGTCTCGACAAGAAGGGCGCTTCTGGC---GAGAAGAACGT 4392898 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 ||| || || ||| | ||||||||||| || |||||||| || || || | || ||||| Sbjct 4392899 TCTCATCTTCGATCTCGGTGGTGGTACATTCGATGTATCTCTCCTCACTATCGAGGAGGG 4392958 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || || || || || || |||||||| || || | || ||||| ||||| || || Sbjct 4392959 TATCTTCGAGGTCAAGGCTACCGCTGGTGACACCCACTTGGGAGGAGAGGATTTCGACAA 4393018 Query 349891 TCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGA 349950 | || || || || | | || || ||||| | || | ||| | | | Sbjct 4393019 CAGACTAGTCAACCACTTCACTCAGGAGTTCAAGCGAAAGAACAAGAAGGATCTCGCCGG 4393078 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || || | || | | || || | ||||| || || || || ||||| || | || Sbjct 4393079 AAACGCTCGTGCCCTCAGACGTCTCCGCACTGCATGCGAGCGAGCAAAGCGAACCCTTTC 4393138 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | |||| ||| | || || ||||| |||||| || |||| || || | | Sbjct 4393139 CTCCGCCGCCCAGACCACCATCGAGATTGACTCTCTTTACGAGGGCATCGACTTTTACAC 4393198 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || || || |||||| | || || || | || |||||| || ||| | || ||||| Sbjct 4393199 CTCCATCACTCGTGCTAGATTCGAGGAGCTGTGCCAGGATCTCTTCAGATCCACCATGGA 4393258 Query 350131 TCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGT 350190 || || || || || | || | || || ||| | | | || | || Sbjct 4393259 CCCAGTCGAGAAGGTCCTCCGCGACTCCAAGATCGACAAGTCTTCCGTACACGAGATTGT 4393318 Query 350191 TTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAA 350250 | || ||||| || || ||||| || | |||||| || | | || || || || || Sbjct 4393319 CCTTGTCGGTGGATCCACCCGTATCCCCAGAGTTCAGAAGCTCGTCTCCGACTTCTTCAA 4393378 Query 350251 TGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGT 350310 ||||| || || | ||| || || || ||||| || || || || ||||| || || Sbjct 4393379 CGGCAAGGAGCCCAACAAATCTATCAACCCCGATGAGGCCGTAGCCTACGGTGCCGCCGT 4393438 Query 350311 TCAGGCATCTATTTTATCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACT 350367 ||||| | || | | || | | | ||| || | | ||||| | || || Sbjct 4393439 CCAGGCTGCCATCCTTACCGG---TGACACTTCCGAGAAGACCCAGGATCTCCTCCTCCT 4393495 Query 350368 AGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 ||||| | || || || || ||| | || ||| | || | || | ||| || || Sbjct 4393496 CGATGTCGCCCCTCTCTCCCTCGGAATTGAGACTGCCGGAGGTGTCTTCACTCCCCTCAT 4393555 Query 350428 TCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAA 350487 |||| | || ||||| || || |||||| | | || || || | ||||| || Sbjct 4393556 CAAGCGAAACACAACCGTACCAACCAAGAAGTCCGAGATCTTCTCCACCTACGCAGACAA 4393615 Query 350488 TCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAA 350547 ||||||| ||| || || || || || || |||||||| || || || || || || Sbjct 4393616 CCAGCCAGGTGTACTCATCCAGGTCTTCGAGGGAGAACGTGCACGAACCAAGGACAACAA 4393675 Query 350548 TAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGAT 350607 || ||| | || || || || || || ||| | || || ||||| | Sbjct 4393676 CCTTCTCGGAAAGTTCGAGCTCTCTGGTATCCCTCCTGCTCCTCGTGGTGTACCTCAAGT 4393735 Query 350608 TGAAGTCTCTTTCGATATTGATTCAAATGGTATTTT 350643 || ||| | |||||| | ||| | || ||||| || Sbjct 4393736 CGAGGTCACCTTCGATGTCGATGCTAACGGTATCTT 4393771 Score = 131 bits (144), Expect = 5e-25 Identities = 347/523 (66%), Gaps = 18/523 (3%) Strand=Plus/Plus Query 350031 TTGAAATTGATTC--TCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 ||||||| || || |||| ||| ||||||||| || | | | || || || Sbjct 781478 TTGAAATCGAGTCCTTCTT--TGAAGGCAAAGATCTCGCTGAGACACTCACGCGCGCCAA 781535 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 ||||||||| | |||||||| || | || ||| | ||||| || |||| || Sbjct 781536 GTTTGAAGAGCTCAACATGGATCTCTTCCGCAAGACGATGAAGCCTGTCGAGCAAGTCTT 781595 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATT--GATGAAGTAGTTTTAGTTGGTGGTTCT 350206 |||||| | | |||| | || |||| || || | || | |||||||| ||| Sbjct 781596 AAAAGACGGAGG--TGTCAAGAAGGAAGATGTAGACGACATTGTCCTCGTTGGTGGATCT 781653 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 ||||| || || ||||| ||||| | || || | || |||||||||||||||||| Sbjct 781654 ACACGAATCCCGAAAGTCCAACAACTCCTCAAGGAATACTTCAATGGCAAAGAACCTTCT 781713 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | ||| || || ||||||||||||||||| || || ||||| |||| | ||| | Sbjct 781714 CAAGGAATCAACCCCGATGAAGCTGTTGCATACGGAGCGGCTGTACAGGGAGGTATCCTC 781773 Query 350327 TCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || ||| | | || ||||| ||| | | || | || || || || | Sbjct 781774 TCGGGAGA-AGAAGGTCTAA-----GGGATATGGTCCTCATCGACGTCTGCCCCCTCACC 781827 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAA--TAGTACTG 350444 || ||| | |||||| | || | || |||||| |||||| ||||| |||| | Sbjct 781828 CTCGGAATCGAAACTACAGGAGGCGTCATGACTAAACTTATTGGAAGAAACTCAGTA--G 781885 Query 350445 TACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAA 350504 |||| ||||| ||| ||| | || || || || ||||| ||||| |||| | Sbjct 781886 TACCGACAAAGAAGAGCCAGATCTTCTCAACTGCAGCGGATAACCAGCCTACGGTTCTCA 781945 Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAA 350547 | || || || || |||||||||||| ||||| ||||| || Sbjct 781946 TCCAGGTCTTCGAGGGTGAACGTGCTATGACTAAGGATAACAA 781988 >seq3 Length=2343223 Score = 87.8 bits (96), Expect = 5e-12 Identities = 189/278 (68%), Gaps = 10/278 (4%) Strand=Plus/Minus Query 378201 ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTT-GACTAGTTTTAACTG 378259 |||||| | ||||| | || || || ||||||||||||| | || ||||| || | Sbjct 2185531 ATCTTCGAGCGCTTTGACCAGACGGCGCTGGATATAACCAGTTTCGGCT-GTTTTGACAG 2185473 Query 378260 CAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAA 378319 | ||||| || | ||| | || || ||||| || |||||| | || || |||||||| Sbjct 2185472 CTGTATCGATAAGACCTTCTCGTCCTCCCATAGCGTGGAAGTAGAACTCCTGAGGAGTAA 2185413 Query 378320 GTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTG 378379 | || | | | | || | || | ||| |||| | | ||||| | ||| | |||| Sbjct 2185412 GACCTCGTAGATAGGAGTTTTCGACAAACCCTCGAGATTCGGGCGAGTAATCGTCCTTTG 2185353 Query 378380 TATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCT 378439 | | || || | || || | || || |||||||| || ||||| || ||| ||| Sbjct 2185352 TGAAGTGTGGCAGAGTGCGGAATTTGAAGCCGTATGGAATACGCTTTCCTTCGACAATCT 2185293 Query 378440 GTTG----ACCAAGTGCAGAAACCATTTGAGCAATATT 378473 | || ||||| |||||| ||||||||| ||||| Sbjct 2185292 GCTGTCCTACCAA-TGCAGA---CATTTGAGCGATATT 2185259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254186443833