Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq7 163 3e-35 seq6 95.1 1e-14 >seq7 Length=1769091 Score = 163 bits (180), Expect = 3e-35 Identities = 638/986 (65%), Gaps = 39/986 (4%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || |||||||||||||||||||| ||||| | |||||| | || | Sbjct 965357 TAGTACATTCCAGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGATGTGAGTTGA 965298 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || | | | || | | | |||||| || ||||| || || || ||| |||| || Sbjct 965297 GCGAAAGTGGGTGATTGGAGGTGGATGTTAAGGGACTGTGATTGATCAATGAACGCGCCT 965238 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 | ||| || | ||||||||||| ||| || |||||||| | || ||||| || Sbjct 965237 CTGTCTGCAGACATGTCGATGATGCTCTTCTGACTGATCTCCCATACTGTGCGGTAGATA 965178 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCT-TGTACGCTCCCACC--GGCTCGCACA-AT 78434 ||||| | ||| || ||| | || | ||| | | ||| || ||| || Sbjct 965177 GCCTTGATCTCGTC-TGGTAGGAAAGGAATGTGTTGGATAGAACCTTGGTGAGCAATGAT 965119 Query 78435 TTCATTCTTAATTTGAGGGTTCCAG----CGATTGATCTTCTGAAGATCCCGGACCAGGT 78490 |||||| | | |||||| ||| |||| | | || |||| || Sbjct 965118 GAGATTCTTGAGGTCTTCATTCCAGTAGCCGA--GATCGACCAAC--TCGCGGAGAAGCC 965063 Query 78491 GCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGT 78550 |||| | || ||||||||| |||| | ||| || ||||||||||| |||| Sbjct 965062 ATGGGTTGACAATCTGGAACTCGCCAGCCAAGACCCGTCGAGTGTAGATGTTGGAGGTGT 965003 Query 78551 ACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTG 78610 | |||||||| ||||||| || | ||||||| ||| || || || |||||||| | Sbjct 965002 ATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTAGGCATGGGGG 964943 Query 78611 CGACCAGTAGAGAATTCCGAAGACCATGCGTCT-TGATCTCGACCTT-----TAGGCC-G 78663 ||| || || || || || ||||| || ||| |||| | | |||| || || | Sbjct 964942 CGAGGAGGAGCGAGTTGCGTAGACCGTG-TTCTCTGATGTTGGCCTTGGATGCAGCCCAG 964884 Query 78664 TCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCC 78723 ||||| || | | || ||||| | || ||||| || | || || Sbjct 964883 TCCCATCTGTCGGAAGGAGTGACTCCCCATAGATCGAACTGAAGCTCGCCTTGAGAAGCT 964824 Query 78724 GGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGA---CTCG 78780 || || || ||| | || || || || ||||| || |||||||| || |||| Sbjct 964823 GGAGAGCCAGGGAAAGACTGATAGTGACCTTCTTCCTTTGCAAGTTCGCAAGAGGCCTCG 964764 Query 78781 AGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAG--CTCGCGCGCCTTGG 78838 || || |||||||| | | |||||||||| ||||||| || ||| ||| | || Sbjct 964763 ---AGAGCGGCGTGGTAGATGGTCTCGAAGATGTCCTTGTTCAGTCGTCGAGCGTC-AGG 964708 Query 78839 TCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAG 78898 || |||||| | | || || ||||||| |||| || || || || || ||||| Sbjct 964707 GCT-GTCGAAAGGCATGCGAAGGGCCATGAAGGCATCTGCGAGACCTTGCACACCGATTC 964649 Query 78899 CGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGAT 78958 | || || || || || | ||| || | ||| ||| | ||||||||||| | Sbjct 964648 CAATAGGGCGATGACGGAAGTTCGAGTTCTGAGCCTCCTTGACGGGGTAAAAGTTGACGT 964589 Query 78959 CGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAAT 79018 ||||||| ||||| ||| | | || ||| || || |||| || || ||| | Sbjct 964588 CGATGACCTTGTTCAAGTTTCTTGCAACTACCTTGGTGACGTCGTGCAGCTTCTGGAAGT 964529 Query 79019 CAAAATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGAT----GCCAGGTTGCACACG 79074 | | | || |||||| ||||| | |||||| |||| |||||| || Sbjct 964528 TGTAGACACCGTCCTTAATGAAA----GTAGGGAGAGCGATAGAGGCCAAGTTGCAGACA 964473 Query 79075 GCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATG 79134 || || || || ||| ||||||||| || |||||||| || || |||||| Sbjct 964472 GCGACTTCATCAGGAGCAGAGTACTCGATGATCTCAGTGCACAAGTTGGAGTTCTTGATC 964413 Query 79135 GTGCCGATGTTCTTCTGGTTGCTCTT 79160 || |||| |||||||||||||||||| Sbjct 964412 GTTCCGAGGTTCTTCTGGTTGCTCTT 964387 Score = 156 bits (172), Expect = 5e-33 Identities = 631/981 (64%), Gaps = 21/981 (2%) Strand=Plus/Plus Query 19850 AATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTT 19909 || ||||||||| |||| |||||||| |||||| |||| ||||| ||||| ||| Sbjct 964393 AACCAGAAGAACCTCGGAACGATCAAGAACTCCAACTTGTGCACTGAGATCATCGAGTAC 964452 Query 19910 TCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGTC 19969 || || || || || || || || |||| || | || || |||||| | Sbjct 964453 TCTGCTCCTGATGAAGTCGCTGTCTGCAACTTGGCCTCTATCGCTCTCCCTACTTTCATT 964512 Query 19970 AAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAAT 20029 |||| | || | |||| || || |||| || ||| ||| || | | || Sbjct 964513 AAGGACGGTGTCTACAACTTCCAGAAGCTGCACGACGTCACCAAGGTAGTTGCAAGAAAC 964572 Query 20030 CTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATG 20089 |||| |||||||| ||||||||||| | ||| ||| | || ||||| | Sbjct 964573 TTGAACAAGGTCATCGACGTCAACTTTTACCCCGTCAAGGAGGCTCAGAACTCGAACTTC 964632 Query 20090 CGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGC 20149 || || || || || | ||||| || || || || || || | |||||| || || Sbjct 964633 CGTCATCGCCCTATTGGAATCGGTGTGCAAGGTCTCGCAGATGCCTTCATGGCCCTTCGC 964692 Query 20150 CTCTCATTCGACGATCCCAAGGCGCG-CGAGCTCAACAAGGGCATCTTCGAGGCCGTGTA 20208 | | |||||| || | || || ||| || ||||||| |||||||||| || | || Sbjct 964693 ATGCCTTTCGACAGCCCTGACGCTCGACGA-CTGAACAAGGACATCTTCGAGACCATCTA 964751 Query 20209 CCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTT 20268 |||||| || ||| || || |||||||| || || || || || | || || | || Sbjct 964752 CCACGCCGCTCTCGAGGCCTCTTGCGAACTTGCAAAGGAAGAAGGTCACTATCAGTCTTT 964811 Query 20269 CAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACT----- 20323 | || || || || || | || || ||| || | ||||| |||||| Sbjct 964812 CCCTGGCTCTCCAGCTTCTCAAGGCGAGCTTCAGTTCGATCTATGGGGAGTCACTCCTTC 964871 Query 20324 -GAGA-ATGAGTTTTGGAGCGCCCTCAAGGTTGAGATCA-AGACCCACGGGCTTCGCAAC 20380 || | ||| | | || || ||||| | |||| ||| | |||| || |||||| Sbjct 964872 CGACAGATGGGACTGGGCT-GCATCCAAGGCCAACATCAGAGAAC-ACGGTCTACGCAAC 964929 Query 20381 TCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAG 20440 ||| | ||| |||| |||||||| || || || ||| ||||||| | || ||||||| Sbjct 964930 TCGCTCCTCCTCGCCCCCATGCCTACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAG 964989 Query 20441 GCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTC 20500 |||||||| ||||| ||||||||||| || || |||| || |||||| Sbjct 964990 TGCTTCGAGCCATACACCTCCAACATCTACACTCGACGGGTCTTGGCTGGCGAGTTCCAG 965049 Query 20501 ATGGTAAACAAGCACCTGGTCCGCGACTTGCAGAAGATC---GATATGTGGTCGCCCAAA 20557 || || ||| || ||||||| ||| | |||| | || ||| | Sbjct 965050 ATTGTCAACCCATGGCTTCTCCGCGAGTTG--GTCGATCTCGGCTA-CTGGAATGAAGAC 965106 Query 20558 ATTAAGAATGAAATTGTCCGAGCCGGCGGGAGCGTCC-AGGCATTGGATATCCCCCAGA- 20615 | |||||| || | | || ||| | |||| | | ||||| Sbjct 965107 CTCAAGAATCTCATCATTGCTCACCAAGGTTCTATCCAACACATTCCTTTCCTACCAGAC 965166 Query 20616 -ACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATG 20674 | |||||| || ||| | || |||||||| ||| ||||||||||||||||||||| Sbjct 965167 GAGATCAAGGCTATCTACCGCACAGTATGGGAGATCAGTCAGAAGAGCATCATCGACATG 965226 Query 20675 GCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAAT 20734 | || || | ||||| | ||| || || || ||||| || || || | | | Sbjct 965227 TCTGCAGACAGAGGCGCGTTCATTGATCAATCACAGTCCCTTAACATCCACCTCCAATCA 965286 Query 20735 CCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACG 20794 || | | || | || | |||||||| | ||||||||| | ||||| |||||||| Sbjct 965287 CCCACTTTCGCTCAACTCACATCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACT 965346 Query 20795 GGCATGTACTATCTGCGGACC 20815 || |||||||| || || ||| Sbjct 965347 GGAATGTACTACCTCCGTACC 965367 Score = 132 bits (146), Expect = 5e-26 Identities = 211/300 (70%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||||||||| || |||||||| |||| ||| ||||| || | |||||| | || || | Sbjct 963901 ACGGTATCGTGCCCATGCTCCGAGTCTACAATAACACCGCTCGATACGTCGATCAAGGAG 963960 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 || ||| || || | || ||||||||| | |||||||||||||| || || | | Sbjct 963961 GCAACAAGCGACCTGGTGCCTTTGCCATCTACATTGAGCCATGGCACGCAGATGTTTTCG 964020 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | |||||||| || ||| |||||| ||| | || || | ||| |||||| |||||| Sbjct 964021 AGTTCCTCGACCTCCGCAAGAACCACGGTAAAGAAGAAGTCCGCGCTCGCGATCTCTTCT 964080 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAG-GTTGAGAAGGACGAAGAATGGCAC 19651 || | ||||| || || | ||||| |||| | || ||| || ||| || |||| Sbjct 964081 ACGCTCTCTGGATCCCCGATATGTTCAT-GAGACGAGTAGAGGAGAACGGTGACTGGCCT 964139 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711 || | ||||| |||| || ||| |||| || ||||| || | ||| ||||| Sbjct 964140 CTCTTCTGCCCTGCCGAAGCACCCAACCTCGCCGAGGTGTACGGAGATGAATTCGATGAG 964199 Score = 125 bits (138), Expect = 8e-24 Identities = 283/423 (67%), Gaps = 2/423 (0%) Strand=Plus/Minus Query 79170 GGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTC 79229 |||||||||||| |||| | || | ||||||||| |||| || || | | | Sbjct 964322 GGCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATA 964263 Query 79230 CCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTA 79289 ||||| | | | ||| |||| |||||| || || | ||||| || | | Sbjct 964262 CCAGAGCTTCTGAGCCTTGACAGTCTTCTTTGCACGTCCTTCCTTCTCGTACTTCAAGAA 964203 Query 79290 CAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACAT 79349 | ||| | ||| | || || || || |||| ||| || ||| ||||| | Sbjct 964202 GAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGCTTCGGCAGGGCAGAA 964143 Query 79350 CAGGTGCCAGTCCTCGTCCTTCTCAAC-CTTCTCCATGAAGAGGTCCGGGATCCACAGGG 79408 || ||||||| ||| || ||| || | |||| ||||| | || |||||||| || | Sbjct 964142 GAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTC-ATGAACATATCGGGGATCCAGAGAG 964084 Query 79409 CCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAA 79468 | |||||| ||||| || | || || | || |||||| || || ||||| | Sbjct 964083 CGTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGAGGTCGAGGA 964024 Query 79469 AGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGC 79528 | || | | || |||||||| ||||| | |||||||| || | ||| |||||| Sbjct 964023 ACTCGAAAACATCTGCGTGCCATGGCTCAATGTAGATGGCAAAGGCACCAGGTCGCTTGT 963964 Query 79529 CGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGC 79588 ||| || || | |||||| || || ||||| ||| | |||||||||||||||||||| | Sbjct 963963 TGCCTCCTTGATCGACGTATCGAGCGGTGTTATTGTAGACTCGGAGCATGGGCACGATAC 963904 Query 79589 CGT 79591 ||| Sbjct 963903 CGT 963901 >seq6 Length=1963780 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || || || |||||||||||||| || ||| || || ||||||||||| |||||||| Sbjct 1098765 GTAGAGGGCATCTTCTTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGT 1098706 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 |||||||| || || | |||||||| ||||| || | ||| || ||||| Sbjct 1098705 CTCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGG 1098656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524724577840