Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 132 1e-25 seq7 120 7e-22 seq1 87.8 4e-12 >seq2 Length=3262383 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| ||||| | ||| || ||| ||| || ||||| || ||||| | || || ||| Sbjct 1222631 AGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAGAGAGTTCTT 1222572 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||| || || || ||||| || | ||||| ||||| || | |||||| Sbjct 1222571 CCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGGATACCTTCC 1222512 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || |||||||| || || || || ||||| || || || || |||||| Sbjct 1222511 TTATCTTGGATCTTGCTCTTAACAGCATCAATCGTGTCGGACGACTCGACTTCCAGAGTG 1222452 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| | ||||| || || | |||||| Sbjct 1222451 ATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 >seq7 Length=1769091 Score = 120 bits (132), Expect = 7e-22 Identities = 174/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 178120 GGCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATG 178179 ||| || ||||| |||||||| |||| ||||| |||||| | || || || Sbjct 964322 GGCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATA 964263 Query 178180 CCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTA 178239 ||| |||| ||| || ||||||||| || || |||||| ||||||||||| | | Sbjct 964262 CCAGAGCTTCTGAGCCTTGACAGTCTTCTTTGCACGTCCTTCCTTCTCGTACTTCAAGAA 964203 Query 178240 GAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAA 178299 |||||| |||||||| ||| || || || |||| ||| || || |||||||| Sbjct 964202 GAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGCTTCGGCAGGGCAGAA 964143 Query 178300 GAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGC 178359 |||| ||| | ||||| |||| |||||| ||||||| | || | | |||||| || Sbjct 964142 GAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGGATCCAGAGAGC 964083 Query 178360 ATAGAA 178365 ||||| Sbjct 964082 GTAGAA 964077 >seq1 Length=4947887 Score = 87.8 bits (96), Expect = 4e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866 || || |||||||||||||||||||||||||||||| ||||||| | | || ||| | Sbjct 307277 CTACCGAAGAAGCACGGAAGAGGAGGACAATCTGCTTTGCGTTTCGCGCGTCTGCGAGAA 307218 Query 139867 GAAAAGAGGCACAACTAC 139884 |||||| ||||||||||| Sbjct 307217 GAAAAGCGGCACAACTAC 307200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151836632015