Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 105 6e-18 >seq2 Length=3262383 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||||| | | ||||| || ||||||||||| || || ||||| ||||| | Sbjct 1222640 CCTCCTCTTAGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAG 1222581 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || |||| | | || || |||||||| |||||||| || || | ||| || || | || Sbjct 1222580 AGAGTTCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGG 1222521 Query 39178 ACGCTCTCTTTGTCCATGAT-TTTCTGTT-TGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | || || || ||| || || || ||| | | | ||| ||| |||||| | Sbjct 1222520 ATACCTTCCTTATCTTGGATCTTGCTCTTAACAGCAT--CAATCGTGTCGGACGACTCGA 1222463 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||| ||||| | |||||||||| ||| ||||| ||||| ||||| Sbjct 1222462 CTTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545542414043