Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 156 9e-33 seq5 89.7 1e-12 >seq2 Length=3262383 Score = 156 bits (172), Expect = 9e-33 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || |||| || | |||||| || || ||||| ||||| || | || || | ||||| Sbjct 1222625 AGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAGAGAGTTCTTCCATCT 1222566 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || ||||| || |||||||| | | ||||| ||| ||| ||||| ||||| ||| Sbjct 1222565 TCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGGATACCTTCCTTATCT 1222506 Query 283008 TGGATCTTTGCTTTTA-CGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 |||||||| ||| ||| | | ||| || ||||| || | |||||||| |||||||| || Sbjct 1222505 TGGATCTT-GCTCTTAACAGCATCAATCGTGTCGGACGACTCGACTTCCAGAGTGATGGT 1222447 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| |||||||| ||||||||||| |||||||| Sbjct 1222446 CTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Score = 96.9 bits (106), Expect = 7e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||||||||| || || ||||| | || |||| ||||||||| || |||| ||| Sbjct 1222240 GGAATACCCTCCTTATCCTGAATCTTGGACTTGACGGCATCGATAGTATCAGAAGACTCG 1222181 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || ||||| ||||| || || | ||||| ||||| ||||||||| Sbjct 1222180 ACCTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTTACGAAGATCTGCATT 1222130 Score = 93.3 bits (102), Expect = 9e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || |||||||| ||||| | ||| |||||| |||||||||||||| | Sbjct 1222413 ACCTCCTCGAAGACGAAGTACGAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 1222354 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTG 282982 || || |||||||| || | ||| || ||||| |||||||| || ||||| Sbjct 1222353 GAGTGTACGGCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGTTG 1222303 >seq5 Length=2034464 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || ||||||| ||||| || || || |||||||||||||| | Sbjct 467739 ACCACCTCGCAGACGGAGTACCAAGTGTAAGGTAGACTCCTTCTGGATGTTGTAGTCGGA 467798 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || || || |||||||| || ||||| || || ||||| | ||| |||||||| Sbjct 467799 GAGGGTTCGTCCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGGTC 467852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739052475194