Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq5 87.8 2e-12 seq8 84.2 2e-11 >seq2 Length=3262383 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || ||||||||||||||||| || || || || ||||| || | | || || Sbjct 1222622 ACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAGAGAGTTCTTCCATCTTCC 1222563 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCAT 41772 ||||| || || || || || || | |||||| || |||||| || ||||| || Sbjct 1222562 AGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGGATACCT-TCCTTATCTTG 1222504 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || ||| ||| | | | |||||| |||||| || |||| || || || | Sbjct 1222503 GATCTTGCTCTT-AACAGCATCAATCGTGTCGGACGACTCGACTTCCAGAGTGATGGTCT 1222445 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| |||||| ||||| |||||||| Sbjct 1222444 TTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | |||| ||||| || |||||||||||| || |||||| | Sbjct 1222129 CCTCCTCGTAGACGAAGGACCAAGTGCAGGGTAGACTCCTTCTGAATATTGTAGTCGCTG 1222070 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||| ||||||||||| |||||||| || || || |||||| Sbjct 1222069 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGG 1222019 >seq5 Length=2034464 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| |||||||||||||| || | || |||||||| ||||| ||||| Sbjct 467775 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCATCCTCGAGCTGTTTGCCAGCGAA 467834 Query 41731 TATCAGGCGCTGTTGGTC 41748 || || ||||||||||| Sbjct 467835 GATGAGACGCTGTTGGTC 467852 >seq8 Length=1378256 Score = 84.2 bits (92), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 41656 CAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAG 41715 || |||||| || ||||||||| ||||| |||||||| ||||| || | || ||||| Sbjct 33957 CACATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGTCCATCCTCGAG 34016 Query 41716 CTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA 41755 ||||||||| ||||| || || ||||| || || |||||| Sbjct 34017 CTGCTTGCCTGCGAAGATGAGACGCTGCTGATCGGGCGGGA 34057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303936433200