Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq545 107 4e-18 seq536 86.0 1e-11 >seq545 Length=209590 Score = 107 bits (118), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||| | | ||| ||| | || |||||||| ||||| || || ||| | Sbjct 94480 CTGATCGGCATGAACTCGGGACTAATGTGTCAATACATCGAGTTCGTGGCGGATCGCCTG 94421 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| | || || |||| |||| ||| | || ||||| | || ||||| Sbjct 94420 CTCGTTGCTTTGGGCGACTCGAAAATGTATGGCTCGACAAATCCCTTCGATTTCATGGAC 94361 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619 | |||||||||||||||||||| || |||||||| ||||| ||| ||| ||| Sbjct 94360 ATGATTTCGCTTCAAGGGAAGACTAATTTCTTCGAGAAGCGGGTCTCTGATTAT 94307 >seq536 Length=346962 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 || ||||| || || || ||||| |||||||| || | || || | |||| ||| Sbjct 161418 CAGGCATCTACTTCAGAGCTGTACGGAAAAGTCGTGGAGACGCCGCAGAGCGAAACTACT 161477 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGATTTGTAAA 61208 || || || || || || |||||||| || || || || || |||||||| Sbjct 161478 CCCTTCTACCCACGCTCGCCATATGGTGTCGCGAAGCTTTATGCGTACTGGATCACAGTC 161537 Query 61209 AATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGAGT 61268 ||||| |||||| |||| || |||| || || ||| |||| ||||||||||||||| Sbjct 161538 AATTATCGCGAGGCGTACGGGATGTATGCTTGCAACGGGATTCTGTTCAATCACGAGAGT 161597 Query 61269 CC 61270 || Sbjct 161598 CC 161599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057812330548430