Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq545 143 3e-29 >seq545 Length=209590 Score = 143 bits (158), Expect = 3e-29 Identities = 297/441 (67%), Gaps = 6/441 (1%) Strand=Plus/Minus Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282 || ||||| | |||| |||||||| ||| | || | || ||||| || || ||| Sbjct 96939 CCCTCGTCGCGTATGATCAGTTCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTC 96880 Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342 || | ||||||||| | || || |||||||| ||||||||||| || |||| |||||| Sbjct 96879 TTGAGCCAGAATATGGATGCGAAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAA 96820 Query 16343 GCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTA---CCCAT 16399 |||| | ||||| || | | || | |||| ||||| ||| |||| Sbjct 96819 GCGACCAGACGTTCTGCAAAGGAAGACTGCTTATCGGCGATCCAGC---GTAACGCCCAA 96763 Query 16400 TCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCC 16459 || || || | || |||||| || || || || || | || | | | || || | Sbjct 96762 TCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTGC 96703 Query 16460 TGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519 | || | ||||| ||||| | |||| | ||| |||| ||||| ||||||||| Sbjct 96702 TTCTGGTCCTTGATATATGTATCGAGGAGTAGAGAATACGTTTCCGAGTGGATGTTCTCT 96643 Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAAT 16579 || ||||| || || ||||| || ||||| || || | |||||||| ||||| Sbjct 96642 ATCATGATCTGGAAACCGTAGAAACAGCGAGCTTCGGCGACCTGTACTTCGTTCGAAAAT 96583 Query 16580 CGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGC 16639 || || | || ||||| |||||||||||||| || || || || || | || ||| Sbjct 96582 CGATCGACAAGATTCTCGTTCACGATACCGTCGGAAGCCGCGAAGAAGGCGAGTACATGC 96523 Query 16640 TTAATGAAATATTTTTCGTCA 16660 || || |||||||| ||| Sbjct 96522 GAGATAAAGTATTTTTCATCA 96502 Score = 134 bits (148), Expect = 1e-26 Identities = 306/458 (67%), Gaps = 2/458 (0%) Strand=Plus/Plus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| ||| || |||||||| || | || || || | ||| || |||||||| || Sbjct 94636 AACAATAGGCAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATGAGTTCGTTCGAG 94695 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || || || ||||| || || ||||| ||||||||||||| || || || || Sbjct 94696 AACGTCAAGCCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAGGCGAACGAGCCG 94755 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 |||||||| || || || || | ||||| || | | || |||||| | | | |||| Sbjct 94756 GAAAAGAAGATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCGAATGAA-CATCC 94814 Query 16373 -TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTC 16431 || | | |||||| | | |||| || || || | || || ||| || || || Sbjct 94815 CTTGTCAGAAATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAAGGAATTGTCTC 94874 Query 16432 TATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 || || | || | | || | || ||| | ||||| || ||||| || | Sbjct 94875 GATAGCATCGAAGAGGTGTTCCCGCTGTTGGGGATCCTTGATATAGGTGTCAATGAGCAG 94934 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 | ||| |||| || || |||||||| || ||||| || |||||||| || || || Sbjct 94935 AGAGTATGTTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGC 94994 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 ||||| ||| ||||| | |||| || || | ||||||||||| || || || || Sbjct 94995 TTCCGCAGCTTGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCATTAACAATCCCATC 95054 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649 | || || ||||| || | | |||| |||||||| Sbjct 95055 AGAGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAAT 95092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511408895902520