Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq329 118 1e-21 seq386 105 8e-18 >seq329 Length=122043 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||||||||||| ||||| ||||| |||| || || || | Sbjct 116596 ACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCC 116655 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || ||||| || |||||||| | || | || |||||| Sbjct 116656 GTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGAATGCCCTCCTT 116715 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | | ||| | | | |||||| || || || |||| || | Sbjct 116716 GTCC-TGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTAA 116774 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || ||||| | |||||| |||||||| ||||| Sbjct 116775 TAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 116811 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||| ||||| || || || ||||| | ||| || || | || || || || || ||| Sbjct 116895 GTGCTTTCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGTTGTTTGCCA 116954 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| || || ||||||||||| | || | | |||||||| ||| || ||| Sbjct 116955 GCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTCGCTTTC 117014 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | | | | ||||| || || || || | |||||| || ||||| || |||||| Sbjct 117015 ACGTTATCAATTGTGTCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCGGTGAGCGTC 117074 Query 43167 TTTACAAAGATTTGCAT 43183 || |||||||||||||| Sbjct 117075 TTGACAAAGATTTGCAT 117091 >seq386 Length=196871 Score = 105 bits (116), Expect = 8e-18 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 42974 CACCAA-ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCAT 43032 |||||| ||| | ||| ||| || |||||||||||||| | ||| |||| | |||| | Sbjct 173882 CACCAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTT 173823 Query 43033 CTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 43092 | | ||||| ||||| || || || |||||||| |||| || | | ||||| ||| Sbjct 173822 CCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCC- 173764 Query 43093 TGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 ||| | || | | ||| | | | |||||| ||| || || || | |||||| || Sbjct 173763 TGAATCTTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTC 173704 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||| |||||||| || || || ||||| Sbjct 173703 TTGCCCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571811445813080