Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq545 159 3e-34 >seq545 Length=209590 Score = 159 bits (176), Expect = 3e-34 Identities = 385/580 (66%), Gaps = 7/580 (1%) Strand=Plus/Plus Query 14183 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 14242 || ||||| | || | || || || || ||| || | ||||||||| | ||||| Sbjct 94624 TTGAGATGGCTGAACAATAGGCAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATG 94683 Query 14243 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||| || || || || || ||||| | || || || || ||||| ||||| | Sbjct 94684 AGTTCGTTCGAGAACGTCAAGCCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAG 94743 Query 14303 GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCA 14362 ||||| || ||||||||||| || || || ||||||||||| || | | || || | Sbjct 94744 GCGAACGAGCCGGAAAAGAAGATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCG 94803 Query 14363 AACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 14422 || || | |||| || ||||| ||||| |||| || || || || || Sbjct 94804 AATGAACATCCCTTGTCAGAAATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAA 94863 Query 14423 TCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATG 14480 ||||| || ||||||| || | |||||| || || | | |||| || || | Sbjct 94864 GGAATTGTCTCGATAGCATCGAAGAGGTGTTCCCGCTGTTGGGGATCCTTG--ATATAGG 94921 Query 14481 TATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCAT 14540 | ||||| || | || |||| || || ||||| ||||| ||||| ||||||| Sbjct 94922 TGTCAATGAGCAGAGAGTATGTTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCAT 94981 Query 14541 AAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCAT 14600 | ||||| | ||||| | ||| || || | |||| | ||| | | || |||| Sbjct 94982 AGAAACACCGCGCTTCCGCAGCTTGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCAT 95041 Query 14601 TAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14660 |||| || |||||| || || ||||| || | | || ||| || | |||| | Sbjct 95042 TAACAATCCCATCAGAGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGT 95101 Query 14661 CATTGCTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTG 14717 | ||| | | || ||||||||| || || || || | || ||||| ||||||| Sbjct 95102 TGTCGCTCAAACGGTTGTTCCAATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTG 95161 Query 14718 TCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 |||| ||| ||| | ||||| || |||||| ||| || Sbjct 95162 TCCAGAAAGAAGCTTCGGCTTTCTTGTACATTTGCCAGAT 95201 Score = 129 bits (142), Expect = 6e-25 Identities = 320/482 (66%), Gaps = 8/482 (2%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 ||||| | | ||| ||||| || |||||| || | |||||| || | | || ||| Sbjct 96978 AGATGGTGATAAAGCAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGT 96919 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 ||||||||| | || | || ||||| | || || || || | ||| ||||| | ||| Sbjct 96918 TCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCG 96859 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || || || || |||||||| || || || |||||||| || | | |||||| |||| Sbjct 96858 AAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAG 96799 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 || | | || | | ||||| | ||||| || | || || || ||| || Sbjct 96798 GAAGACTGCTTATCGGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGT 96739 Query 14426 ATTGTTTCAATAGCATTAAATAAAT--GTTCCTTCTCTTTAGTACTTGAAATGTATGTAT 14483 || || || ||||| | || | || | || || | | || |||| || ||||||| Sbjct 96738 ATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTG--ATATATGTAT 96681 Query 14484 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14543 | | |||| |||| |||| ||||| ||||| || || ||||| ||||| || | Sbjct 96680 CGAGGAGTAGAGAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGA 96621 Query 14544 AACATCTAGCTTC--TGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATT 14601 |||| | |||||| |||| ||||| || |||||| ||| | | ||| || || Sbjct 96620 AACAGCGAGCTTCGGCGACC--TGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTT 96563 Query 14602 AACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC 14661 || ||||| || ||| || || || || | || | |||||||||| || || Sbjct 96562 CACGATACCGTCGGAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATC 96503 Query 14662 AT 14663 || Sbjct 96502 AT 96501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482340408755480