Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq545 206 3e-48 >seq545 Length=209590 Score = 206 bits (228), Expect = 3e-48 Identities = 384/561 (68%), Gaps = 6/561 (1%) Strand=Plus/Minus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 |||||| |||||||| ||||| |||||||| | | || | |||||| ||| |||| Sbjct 96964 CAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGTTCGTTTGAATACGT 96905 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 || || ||||| || |||||||| || ||||| |||||||| ||||| || || || || Sbjct 96904 AAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCGAAAGACCCCGAGAA 96845 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GCTG-TC 33754 ||| || ||||| || |||||||| || | || | ||| || | | ||| || Sbjct 96844 GAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAGGAAGACTGCTTATC 96785 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 ||||| | |||||||| |||||||| || | |||||| || || || || || Sbjct 96784 GGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAGC 96725 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 | ||||||| | || || || || | ||| ||||||| | ||| ||| Sbjct 96724 GTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTGATATATGTATCGAGGAGTAGAGAATA 96665 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934 | ||||||| || ||||| || || ||||| || ||||||||||| | ||| |||| Sbjct 96664 CGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAACAGCGAGCTTCGGC 96605 Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994 | ||| ||||| | ||||||| || | | ||| || ||||| || || || || Sbjct 96604 GACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACGATACCGTCGGAAGC 96545 Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 34051 || || || || | |||||| ||||| |||||||| || ||| | | || Sbjct 96544 CGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATCATCATTTAAGCGGTCCTT 96485 Query 34052 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 34111 ||| || || ||| | || | || | ||||| | |||||||| ||||||||||| Sbjct 96484 CCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCAAAAAGATGCCTCTGC 96425 Query 34112 CTTTTTATACATATTCCAGAT 34132 || || ||||| | ||| || Sbjct 96424 TTTCTTGTACATCTGCCAAAT 96404 Score = 185 bits (204), Expect = 1e-41 Identities = 378/558 (68%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| || ||||| ||||| || | ||||| | |||||| || ||||| | Sbjct 94645 CAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATGAGTTCGTTCGAGAACGTCAAG 94704 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || | ||| ||||| || ||||| || |||||||||||| Sbjct 94705 CCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAGGCGAACGAGCCGGAAAAGAAG 94764 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT-AACCGGCGCTGTCATGT 33758 || ||||| |||||||||||||||| || | ||| | || ||| | ||||| Sbjct 94765 ATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCGAATGAACATCCCTTGTCAGAA 94824 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| | |||||||| |||||||| || | ||||| || || || || |||| Sbjct 94825 ATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAAGGAATTGTCTCGATAGCATCG 94884 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 ||||| | | | | ||| || | ||| || || || | ||| || || Sbjct 94885 AAGAGGTGTTCCCGCTGTTGGGGATCCTTGATATAGGTGTCAATGAGCAGAGAGTATGTT 94944 Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 || ||||||||||| || || ||||| || || |||||||| | || || | | Sbjct 94945 TCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGCTTCCGCAGCT 95004 Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998 || ||||| | |||| || || | | || ||||| || || |||||| ||| || Sbjct 95005 TGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCATTAACAATCCCATCAGAGGCGGCG 95064 Query 33999 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCA 34054 ||||| || | || || || |||| |||| || | | | || ||||| Sbjct 95065 AAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGT-TGTCGCTCAAACGGTTGTTCCA 95123 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 ||| | | ||||| || | || ||||| || |||||||| || || || || || || Sbjct 95124 ATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTGTCCAGAAAGAAGCTTCGGCTTT 95183 Query 34115 TTTATACATATTCCAGAT 34132 || ||||| | |||||| Sbjct 95184 CTTGTACATTTGCCAGAT 95201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629810821588080