Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30]
861 sequences; 28,378,039 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq386 107 2e-18
seq329 104 2e-17
seq545 96.9 3e-15
>seq386
Length=196871
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| | ||||| ||| ||||| || |||||||||||||| |
Sbjct 173670 CCACCGCGGAGACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCCGAC 173611
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || || ||||||||||||||| |||| ||||| || || || || ||
Sbjct 173610 AAAGTGCGACCATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGG 173551
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | || | | || | ||||| | | ||||||
Sbjct 173550 ATACCTTCCTTGTC-TTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGACTCCAC 173492
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | || | ||||| || |||||||| || || || || |||||
Sbjct 173491 CTCTAACGTGATTGTCTTTCCTGTCAACGTCTTGACAAAAATCTGCAT 173444
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| || |||||||| ||||| || ||||| || || ||| |||||| | ||
Sbjct 173874 TGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTTCCAATTGC 173815
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| |||||| |||| || || |||||||||||||| || ||||| || || ||| | ||
Sbjct 173814 TTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATC-CTGAATCTT 173756
Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| || | | || | ||||| | | ||| ||||| | || | |||||||| ||
Sbjct 173755 GGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTCTTGCCCGT 173696
Query 139741 CAACGTTTTTACGAATATTTGCATA 139765
| ||| || ||||| || ||||||
Sbjct 173695 AAGCGTCTTCACGAAAATCTGCATA 173671
>seq329
Length=122043
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 139574 TCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAG 139633
|| || || |||||||||||| || |||| |||||||| ||||| ||||| ||
Sbjct 116901 TCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGTTGTTTGCCAGCGAAG 116960
Query 139634 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT 139693
|| ||||| ||||| || || || || ||||| ||||| ||| || ||| | |
Sbjct 116961 ATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTCGCTTTCACGTTA 117020
Query 139694 TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACG 139753
|| | |||||| | | ||| ||||| | || | |||||||||||| | ||| || ||
Sbjct 117021 TCAATTGTGTCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCGGTGAGCGTCTTGACA 117080
Query 139754 AATATTTGCATA 139765
|| |||||||||
Sbjct 117081 AAGATTTGCATA 117092
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 139559 AAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGC 139618
||||| | ||| ||| || |||||||||||||| | |||| || ||||||
Sbjct 117168 AAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGAGC 117227
Query 139619 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATT 139678
|| || || || |||| || || || |||||||||||||||||||| || || |||
Sbjct 117228 TGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGATC 117287
Query 139679 TTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCG 139738
|| || | | || | ||||||| | || ||||| | || | ||||||||
Sbjct 117288 TTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGCCC 117347
Query 139739 GTCAACGTTTTTACGAATATTTGCATA 139765
|||| ||| || || || || ||||||
Sbjct 117348 GTCAGCGTCTTGACAAAGATCTGCATA 117374
>seq545
Length=209590
Score = 96.9 bits (106), Expect = 3e-15
Identities = 126/172 (73%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 52612 TTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTT 52671
||||| |||||||||||||| |||||| || |||||| | || || ||||| |||
Sbjct 96800 TTTGCAGAACGTCTGGTCGCTTTTGCTGCTGTCGAAGGTATATTCTTCTCGGGGTCTTTC 96859
Query 52672 GCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGA 52730
|| | ||||| | |||| || | ||||| | ||||| || || |||| | |||||
Sbjct 96860 GCATCCATATTCTGGCTCAAGAAGCGTGGGC-TTATGCCTGGTCTTACGTATTCAAACGA 96918
Query 52731 GTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTAT 52782
|||| |||||||| || |||||||| ||||| || |||||| ||||
Sbjct 96919 ACTGATCATACGCGACGAGGGCATGCACACTGATTTCGCCTGTTTGCTTTAT 96970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496058661111200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |