Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq545 150 2e-31 >seq545 Length=209590 Score = 150 bits (166), Expect = 2e-31 Identities = 383/580 (66%), Gaps = 7/580 (1%) Strand=Plus/Plus Query 13851 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 13910 || ||||| | || | || || || || ||| || | ||||||||| | ||||| Sbjct 94624 TTGAGATGGCTGAACAATAGGCAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATG 94683 Query 13911 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 |||||||| || || || || || ||||| | || || || || ||||| ||||| | Sbjct 94684 AGTTCGTTCGAGAACGTCAAGCCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAG 94743 Query 13971 GCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCA 14030 || || || ||||||||||| || || || ||||||||||| || | | || || | Sbjct 94744 GCGAACGAGCCGGAAAAGAAGATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCG 94803 Query 14031 AACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 14090 || || | |||| || ||||| ||||| |||| || || || || || Sbjct 94804 AATGAACATCCCTTGTCAGAAATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAA 94863 Query 14091 TCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATG 14148 ||||| || ||||||| || | | |||| || || | | |||| || || | Sbjct 94864 GGAATTGTCTCGATAGCATCGAAGAGGTGTTCCCGCTGTTGGGGATCCTTG--ATATAGG 94921 Query 14149 TATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCAT 14208 | ||||| || | || |||| || || ||||| ||||| ||||| ||||||| Sbjct 94922 TGTCAATGAGCAGAGAGTATGTTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCAT 94981 Query 14209 AAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCAT 14268 | || || | ||||||| ||| ||||| | |||| | ||| | | || |||| Sbjct 94982 AGAAACACCGCGCTTCCGCAGCTTGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCAT 95041 Query 14269 TAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14328 |||| || |||||| || || ||||| || | | || ||| || | |||| | Sbjct 95042 TAACAATCCCATCAGAGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGT 95101 Query 14329 CATTGTTGA---GTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTG 14385 | | | | | || ||||||||| || || || || | || ||||| ||||||| Sbjct 95102 TGTCGCTCAAACGGTTGTTCCAATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTG 95161 Query 14386 TCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 |||| ||| ||| | ||||| || |||||| ||| || Sbjct 95162 TCCAGAAAGAAGCTTCGGCTTTCTTGTACATTTGCCAGAT 95201 Score = 132 bits (146), Expect = 5e-26 Identities = 374/570 (66%), Gaps = 11/570 (2%) Strand=Plus/Minus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 ||||| | | ||| ||||| || |||||| || | |||||| || | | || ||| Sbjct 96978 AGATGGTGATAAAGCAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGT 96919 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 ||||||||| | || | || ||||| | || || || || | ||| ||||| | || Sbjct 96918 TCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCG 96859 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || ||||| || |||||||| || || || |||||||| || | | |||||| |||| Sbjct 96858 AAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAG 96799 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093 || | | || | | ||||| | ||||| || | || || || ||| || Sbjct 96798 GAAGACTGCTTATCGGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGT 96739 Query 14094 ATTGTTTCAATAGCATTAAATAAAT--ATTCCTTCTCTTTAGTACTTGAAATGTATGTAT 14151 || || || ||||| | || | || || || | | || |||| || ||||||| Sbjct 96738 ATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTG--ATATATGTAT 96681 Query 14152 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14211 | | |||| |||| |||| ||||| ||||| || || ||||| ||||| || | Sbjct 96680 CGAGGAGTAGAGAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGA 96621 Query 14212 AGCATCTAGCTTC--CGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATT 14269 | || | |||||| ||||| |||||||| |||||| ||| | | ||| || || Sbjct 96620 AACAGCGAGCTTCGGCGACC--TGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTT 96563 Query 14270 AACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC 14329 || ||||| || ||| || || || || | || | |||||||||| || || Sbjct 96562 CACGATACCGTCGGAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATC 96503 Query 14330 ATTGTT---GAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGT 14386 || || | | | ||||| || | | ||| | || || || | || || | || Sbjct 96502 ATCATTTAAGCGGTCCTTCCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGT 96443 Query 14387 CCAAAAACTAGCGACAGCTTTTTTATACAT 14416 ||||||| || | ||||| || ||||| Sbjct 96442 CCAAAAAGATGCCTCTGCTTTCTTGTACAT 96413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479722836927400