Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq545 165 8e-36 >seq545 Length=209590 Score = 165 bits (182), Expect = 8e-36 Identities = 386/580 (67%), Gaps = 7/580 (1%) Strand=Plus/Plus Query 13639 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 13698 || ||||| | || | || || || || ||| || | ||||||||| | ||||| Sbjct 94624 TTGAGATGGCTGAACAATAGGCAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATG 94683 Query 13699 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 |||||||| || || || || || ||||| | || || || || ||||| ||||| | Sbjct 94684 AGTTCGTTCGAGAACGTCAAGCCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAG 94743 Query 13759 GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCA 13818 ||||| || ||||||||||| || || || ||||||||||| || | || || || | Sbjct 94744 GCGAACGAGCCGGAAAAGAAGATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCG 94803 Query 13819 AACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 13878 || || | |||| || ||||| ||||| |||| || || || || || Sbjct 94804 AATGAACATCCCTTGTCAGAAATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAA 94863 Query 13879 TCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATG 13936 ||||| ||||| |||| ||| | |||||| || || | | |||| || || | Sbjct 94864 GGAATTGTCTCGATAGCATCGAAGAGGTGTTCCCGCTGTTGGGGATCCTTG--ATATAGG 94921 Query 13937 TATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCAT 13996 | ||||| || | || |||| || || ||||| || || ||||| ||||||| Sbjct 94922 TGTCAATGAGCAGAGAGTATGTTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCAT 94981 Query 13997 AAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCAT 14056 | ||||| | ||||| | ||| || || | |||| | || | | ||| |||| Sbjct 94982 AGAAACACCGCGCTTCCGCAGCTTGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCAT 95041 Query 14057 TAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14116 ||||||| |||||| || || ||||| || | | || ||| || | |||| | Sbjct 95042 TAACAATCCCATCAGAGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGT 95101 Query 14117 CATTGTTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTG 14173 | | | | | || ||||||||| || || || || | || ||||| ||||||| Sbjct 95102 TGTCGCTCAAACGGTTGTTCCAATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTG 95161 Query 14174 TCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213 |||| ||| ||| | ||||| || |||||| ||| || Sbjct 95162 TCCAGAAAGAAGCTTCGGCTTTCTTGTACATTTGCCAGAT 95201 Score = 136 bits (150), Expect = 4e-27 Identities = 324/483 (67%), Gaps = 10/483 (2%) Strand=Plus/Minus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 ||||| | | ||| ||||| || |||||| || | |||||| || | | || ||| Sbjct 96978 AGATGGTGATAAAGCAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGT 96919 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 ||||||||| | || | || ||||| | || || || || | ||| ||||| | ||| Sbjct 96918 TCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCG 96859 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 || || || || |||||||| || || || |||||||| || | || |||||| |||| Sbjct 96858 AAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAG 96799 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 || | | || | | ||||| | ||||| || | || || || ||| || Sbjct 96798 GAAGACTGCTTATCGGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGT 96739 Query 13882 ATTGTTTCGATTGCATTGAATAAAT--GTTCCTTCTCTTTAGTACTTGAAATGTATGTAT 13939 || || ||||| || | ||| | || | || || | | || |||| || ||||||| Sbjct 96738 ATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTG--ATATATGTAT 96681 Query 13940 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAA 13999 | | |||| |||| |||| ||||| ||||| ||||| ||||| ||||| || | Sbjct 96680 CGAGGAGTAGAGAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGA 96621 Query 14000 AACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG-TTTTCAT 14056 |||| | |||||| |||| ||||| || |||||| || | |||| || || | Sbjct 96620 AACAGCGAGCTTCGGCGACC--TGTACTTCGTTCGAAAATCGATC-GACAAGATTCTCGT 96564 Query 14057 TAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14116 | || ||||| || ||| || || || || | || | |||||||||| || | Sbjct 96563 TCACGATACCGTCGGAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCAT 96504 Query 14117 CAT 14119 ||| Sbjct 96503 CAT 96501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478583649188040