Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq329 89.7 4e-13 >seq329 Length=122043 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || ||||| | | |||||| |||| |||||||||||| || | ||||| || || Sbjct 116585 CCGCCGCGCAGACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 116644 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| |||| || | || || ||||||||||| | || || || || | || Sbjct 116645 AGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGA 116704 Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | || || || || ||| ||| | | || || || | | |||||| || ||| || Sbjct 116705 ATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAAC 116763 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| ||||| || | || || ||||| || ||||| Sbjct 116764 CTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 116811 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 42902 CCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCA 42961 |||| |||| ||| |||||||| || | || ||||| || | || || | || || | Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 42962 ATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA 43021 || |||||||| || || | ||||||||||||| || | ||||| || || || Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 43022 TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTC 43081 || | | || || || ||| |||||| || || || || | ||| || || || | Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345 Query 43082 CGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || || || || ||||| || ||||| Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381365598121938