Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq545 201 2e-46 seq549 84.2 3e-11 >seq545 Length=209590 Score = 201 bits (222), Expect = 2e-46 Identities = 383/562 (68%), Gaps = 8/562 (1%) Strand=Plus/Minus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 |||||| |||||||| ||||| ||||| || | | || | |||||| ||| |||| Sbjct 96964 CAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGTTCGTTTGAATACGT 96905 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 || || ||||| || |||||||| || ||||| ||||| || || || || || || || Sbjct 96904 AAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCGAAAGACCCCGAGAA 96845 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG----T 42236 ||| || ||||| || || ||||| || | || | ||| || | | |||| | Sbjct 96844 GAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAGGAAG-ACTGCTTAT 96786 Query 42237 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 42296 | ||||| | |||||||| |||||||| || | |||||| || || || || | Sbjct 96785 CGGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAG 96726 Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTAT 42356 | | ||||||| | || || || || | ||||||||||| | ||| || Sbjct 96725 CGTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTGATATATGTATCGAGGAGTAGAGAAT 96666 Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416 || |||| || || ||||| || || ||||| || ||||||||||| | || |||| Sbjct 96665 ACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAACAGCGAGCTTCGG 96606 Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476 ||||||||||| | ||||||| || | | ||| |||||||| || ||||| | Sbjct 96605 CGACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACGATACCGTCGGAAG 96546 Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA---TTTAT 42533 | || || || || | |||||| ||||| |||||||| || |||| | | Sbjct 96545 CCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATCATCATTTAAGCGGTCCT 96486 Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593 |||| || || ||| | || | || | ||||| | |||||||| ||||| |||| Sbjct 96485 TCCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCAAAAAGATGCCTCTG 96426 Query 42594 CCTTTTTATACATATTCCAGAT 42615 | || || ||||| | ||| || Sbjct 96425 CTTTCTTGTACATCTGCCAAAT 96404 Score = 167 bits (184), Expect = 3e-36 Identities = 374/557 (67%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| || ||||| |||||||| | ||||| | |||||| || ||||| | Sbjct 94645 CAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATGAGTTCGTTCGAGAACGTCAAG 94704 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| || |||||||| || | ||| ||||| || || || || || ||||||||| Sbjct 94705 CCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAGGCGAACGAGCCGGAAAAGAAG 94764 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--AT-AACCGGCACTGTCATGT 42241 || ||||| ||||| |||||||||| || | ||| | || ||| | ||||| Sbjct 94765 ATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCGAATGAACATCCCTTGTCAGAA 94824 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 ||||| | |||||||| |||||||| || | ||||| || || || || |||| Sbjct 94825 ATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAAGGAATTGTCTCGATAGCATCG 94884 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 ||||| | | | | ||| || | ||| || || || | ||| || || Sbjct 94885 AAGAGGTGTTCCCGCTGTTGGGGATCCTTGATATAGGTGTCAATGAGCAGAGAGTATGTT 94944 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || ||||||||||| || || ||||| || || |||||||| | || || | | | Sbjct 94945 TCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGCTTCCGCAGCT 95004 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || ||||| | |||| || || | | || || || || || || ||| ||| || Sbjct 95005 TGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCATTAACAATCCCATCAGAGGCGGCG 95064 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-ATTTATTCCAA 42538 ||||| || | || || || |||| |||| || | | || |||||| Sbjct 95065 AAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGTTGTCGCTCAAACGGTTGTTCCAA 95124 Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598 || | | ||||| || | || ||||| || || ||||| || || ||||| || || Sbjct 95125 TCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTGTCCAGAAAGAAGCTTCGGCTTTC 95184 Query 42599 TTATACATATTCCAGAT 42615 || ||||| | |||||| Sbjct 95185 TTGTACATTTGCCAGAT 95201 >seq549 Length=95171 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 72034 AAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 || |||||||||||||| || || ||| |||||||| | || | | ||||| || || Sbjct 69648 AAAAGATCAGGAATCCAGAGCGC-ATAGAATAGATCCCGGGCACGAACTTCCTCCTTACC 69590 Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152 |||||| |||||| | |||| | | |||||| |||||||| |||| |||||| Sbjct 69589 GTGATTCTTGCGAAGATCCAAGAACTCGAAGATATCATCGTGCCACGGCTCCAGGTATAT 69530 Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212 ||| | | ||||| || ||||| || || || || | || | ||||| || || Sbjct 69529 GGCAAACGCGCCCGGACGCTTGTTACCACCTTGGTCCACATACCGTGCGGTTGCATCGTA 69470 Query 72213 AACTCTCAACATTGGAATAATACCATTGGA 72242 | | | ||| || | ||||||||| || Sbjct 69469 CGCACGGAGCATAGGGACAATACCATTCGA 69440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131976864360