Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq545 170 3e-37 >seq545 Length=209590 Score = 170 bits (188), Expect = 3e-37 Identities = 381/561 (68%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| | |||||||| || || |||| || |||||||| | ||||||| | || || Sbjct 96404 ATTTGGCAGATGTACAAGAAAGCAGAGGCATCTTTTTGGACTGCCGAAGAGATTGACCTC 96463 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || | || || | || ||| || || || | ||| ||| | | ||||| ||| Sbjct 96464 TCACACGATCTCTGGGACTGGAAGGACCGCTTAAATGATGATGAAAAATACTTTATCTCG 96523 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | | |||||||| || | ||||| || ||||| ||||| ||||| || || || Sbjct 96524 CATGTACTCGCCTTCTTCGCGGCTTCCGACGGTATCGTGAACGAGAATCTTGTCGAT-CG 96582 Query 125198 ATTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 ||| || | || | || || | || | ||| || || ||||| ||||| |||||| Sbjct 96583 ATTTTCGAACGAAGT-ACAGGTCGCCGAAGC-TCGCTGTTTCTACGGTTTCCAGATCATG 96640 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | |||||||||| ||| ||| ||| | || | || || || | | Sbjct 96641 ATAGAGAACATCCACTCGGAAACGTATTCTCTACTCCTCGATACATATATCAAGGACCAG 96700 Query 125316 ---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 ||||| | | ||| ||||| |||| ||||| || | || | ||| || ||| Sbjct 96701 AAGCAACG--AGCGCAT-CTCTTCGACGCTATCGAGACTATACCTTGTATCAAGAAGAAG 96757 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| | | || ||||||| || | ||||||| | || || | ||||| Sbjct 96758 GCGGATTGGGCGTTACGCTGGATCGCCGATAAGCAGTCTTCCTTTGCAGAACGTCTGGTC 96817 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || || || || ||||| ||||| ||| || |||| || |||||| Sbjct 96818 GCTTTTGCTGCTGTCGAAGGTATATTCTTCTCGGGGTCTTTCGCATCCATATTCTGGCTC 96877 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || || ||||| || || ||| | ||||| | || || |||||| Sbjct 96878 AAGAAGCGTGGGCTTATGCCTGGTCTTACGTATTCAAACGAACTGATCATACGCGACGAG 96937 Query 125553 GGCCTACACTGTGACTTTGCC 125573 ||| | ||| ||| || ||| Sbjct 96938 GGCATGCACACTGATTTCGCC 96958 Score = 159 bits (176), Expect = 5e-34 Identities = 382/572 (67%), Gaps = 12/572 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| || || | || || || ||||| || || || ||||| || Sbjct 95201 ATCTGGCAAATGTACAAGAAAGCCGAAGCTTCTTTCTGGACAGTTGAGGAAGTCGACTTG 95142 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || ||| | |||||||| | | ||||||| || | ||||| | || || ||| Sbjct 95141 TCGAAAGACTTTCACGATTGGAACAACCGTTTGAGCGACAACGAGCGTCATTTCATTTCG 95082 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || || || |||| ||| ||||| || || || || || || || || || Sbjct 95081 CACGTCCTTGCTTTTTTCGCCGCCTCTGATGGGATTGTTAATGAGAACCTTGTCGAG-CG 95023 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 || || | || | ||| | | || | | ||| || || || ||||| |||||| Sbjct 95022 TTTTTCCAACGAAGT--CCAAGCTGCGGAAGCGCGGTGTTTCTATGGTTTCCAGATCATG 94965 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | || || |||| |||||| || ||||||| || || ||||| Sbjct 94964 ATGGAGAACATTCATTCCGAAACATACTCTCTGCTCATTGACACCTATATCAAGGATCCC 94905 Query 125316 CAAC---GTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 |||| | ||||| ||||| | || ||||| || | || | || || ||| Sbjct 94904 CAACAGCGGGAACAC---CTCTTCGATGCTATCGAGACAATTCCTTGCATCAAGAAGAAG 94848 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| | | || ||||| |||| | | ||| | ||| || | ||||| Sbjct 94847 GCTGATTGGGCGCTGCGCTGGATTTCTGACAAGGGATGTTCATTCGCGGAGCGTCTGGTT 94788 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || || || ||||||||||| || || || | || || ||| | Sbjct 94787 GCCTTTGCTGCAGTCGAAGGGATCTTCTTTTCCGGCTCGTTCGCCTCGATATTCTGGTTG 94728 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || || |||||||| ||||| | ||||| | || || || ||| Sbjct 94727 AAGAAGCGTGGTCTTATGCCCGGCTTGACGTTCTCGAACGAACTCATTAGCCGCGATGAG 94668 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT 125584 ||| | ||| |||||| ||| ||| |||| Sbjct 94667 GGCATGCACACTGACTTCGCCTGCCTATTGTT 94636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051224350360