Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq545 116 3e-21 >seq545 Length=209590 Score = 116 bits (128), Expect = 3e-21 Identities = 176/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 |||| |||||||| || |||||| || ||||||||||| ||||| | || || | Sbjct 94943 TTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGCTTCCGCAG 95002 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 | || |||||| | |||| | || | | ||| || ||||| ||||| ||| || | Sbjct 95003 CTTGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCATTAACAATCCCATCAGAGGCGG 95062 Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACC 13625 | ||||||||||| | |||| ||| || | ||||| || ||| || || Sbjct 95063 CGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGTTGTCGCTCAAACGGTTGTTCC 95122 Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685 |||| |||| ||||| || || || || |||||||| ||||| |||||||| | || | Sbjct 95123 AATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTGTCCAGAAAGAAGCTTCGGCTT 95182 Query 13686 TCTTATACAT 13695 |||| ||||| Sbjct 95183 TCTTGTACAT 95192 Score = 109 bits (120), Expect = 5e-19 Identities = 308/473 (65%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 ||||| | | | | || ||| || |||||| ||||| || || || | | || || Sbjct 96978 AGATGGTGATAAAGCAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGT 96919 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 ||||||||| | || ||||| ||||||||||| || || || | ||| ||||| | || Sbjct 96918 TCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCG 96859 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 || || ||||| || ||||| ||||| || || ||||| || | || | ||| || | Sbjct 96858 AAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAG 96799 Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372 | | | ||| | ||||| | ||||| | || || | || | || Sbjct 96798 GAAGACTGCTTATCGGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGT 96739 Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432 ||| | || || |||| || | || | || ||| ||| ||||| ||||| Sbjct 96738 ATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTGATATATGTATCG 96679 Query 13433 ATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAA 13492 | | || |||| |||| || || || || || ||| || |||||||| || ||| Sbjct 96678 AGGAGTAGAGAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAA 96619 Query 13493 CATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACT 13552 || | ||| || | ||||| |||||| |||||| || | | || ||||| || Sbjct 96618 CAGCGAGCTTCGGCGACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACG 96559 Query 13553 ATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC 13605 || ||||| ||| || || || || |||| ||| ||||| | |||||| Sbjct 96558 ATACCGTCGGAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTC 96506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430977877513122