Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq386 147 5e-30 seq329 120 7e-22 seq545 113 1e-19 >seq386 Length=196871 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | || || |||||||||||||| || || || || || || |||||||| | | Sbjct 173877 AGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTTCCAAT 173818 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || ||||||||||| || || | ||| ||||| ||||| || ||||| |||||||||||| Sbjct 173817 TGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCTGAATC 173758 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || || || || || | || || | || ||||| || || |||||||| || Sbjct 173757 TTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTCTTGCCC 173698 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || |||||||| Sbjct 173697 GTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || || || | ||||| || || || | || || || Sbjct 173363 GTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGCTTCCCT 173304 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | |||||||||||| || |||||||| || || |||||||| || || Sbjct 173303 GCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTCGCCTTC 173244 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || | || ||||| || || || ||||| ||||| |||||| Sbjct 173243 ACGTTATCAATAGTGTCCGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGTCAGTGTT 173184 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 173183 TTCACGAAGATCTGCAT 173167 >seq329 Length=122043 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || |||||||| || || | ||||| || || || || || |||||| Sbjct 116621 TCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAA 116680 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || || || || || || || || || ||||||||||| || || || || Sbjct 116681 ATGAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG 116740 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| ||| || || ||||| || ||||||||||| || || | || || ||| Sbjct 116741 TCGATGGTGTCGGAAGACTCAACCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTGACA 116800 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 116801 AAGATCTGCAT 116811 >seq545 Length=209590 Score = 113 bits (124), Expect = 1e-19 Identities = 366/562 (65%), Gaps = 10/562 (2%) Strand=Plus/Plus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 || ||| ||||||||| | || | || ||||||||||||| ||||| | || || Sbjct 96404 ATTTGGCAGATGTACAAGAAAGCAGAGGCATCTTTTTGGACTGCCGAAGAGATTGACCTC 96463 Query 268793 TCTTATGACTTAATAGATTGGAAAAAT---TTAAAACCAGAAGAAAGAAGATTTATATCT 268849 || | || | || ||||| | ||||| || |||| | ||||| || Sbjct 96464 TCACACGATCTCTGGGACTGGAAGGACCGCTTAAATGATGATGAAAAATACTTTATCTCG 96523 Query 268850 TATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAG 268909 || | || || || || || | | || |||||||| ||||| ||||| || || Sbjct 96524 CATGTACTCGCCTTCTTCGCGGCTTCCGACGGTATCGTGAACGAGAATCTTGTCGATCGA 96583 Query 268910 TTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATA 268969 || | | || |||||| | | ||||| | ||||| ||||| |||||||| ||| Sbjct 96584 TTTTCGAACGAAGTACAGGTCGCCGAAGCTCGCTGTTTCTACGGTTTCCAGATCATGATA 96643 Query 268970 GAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAAC 269029 || || || || || || | ||| |||| | | ||||| ||||| | || | || Sbjct 96644 GAGAACATCCACTCGGAAACGTATTCTCTACTCCTCGATACATATATCAAGGACCAGAA- 96702 Query 269030 GAAAAGAAAAGA-CTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTG 269087 | || || | || || |||| |||| |||| ||| | | || || | | Sbjct 96703 GCAACGAGCGCATCTCTTCGACGCTATCGAGA-CTATACCTTGTATCAAGAAGAAGGCGG 96761 Query 269088 AATGGGCTCTGAAATGGATAAACGATAGCGCGCCTTAC---GGAGAAAGGTTAGTTGCTT 269144 | ||||| | ||||| ||||| | ||| | | |||| | | || |||| Sbjct 96762 ATTGGGCGTTACGCTGGATCGCCGATAAGCAGTCTTCCTTTGCAGAACGTCTGGTCGCTT 96821 Query 269145 TTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGA 269204 |||| ||||| |||||||||||||| ||||||||||| || | || || ||| | |||| Sbjct 96822 TTGCTGCTGTCGAAGGTATATTCTTCTCGGGGTCTTTCGCATCCATATTCTGGCTCAAGA 96881 Query 269205 AAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTT 269264 | | || |||||||| || | || | || |||||| |||| | | ||||| || Sbjct 96882 AGCGTGGGCTTATGCCTGGTCTTACGTATTCAAACGAACTGATCATACGCGACGAGGGCA 96941 Query 269265 TACACTGCGACTTCGCTTGTTT 269286 | ||| || ||||| ||||| Sbjct 96942 TGCACACTGATTTCGCCTGTTT 96963 Score = 104 bits (114), Expect = 5e-17 Identities = 369/567 (65%), Gaps = 26/567 (5%) Strand=Plus/Minus Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801 |||||||| | |||| |||||||| ||||| || || ||||| || |||| | ||| Sbjct 95192 ATGTACAAGAAAGCCGAAGCTTCTTTCTGGACAGTTGAGGAAGTCGACTTGTCGAAAGAC 95133 Query 268802 TTAATAGATTGGAAAAAT--TTAAAACCAGAAGAAAGAAGATTT-ATATCTTATATTCTT 268858 || |||||||| || || | | | || | |||| || || | | ||| Sbjct 95132 TTTCACGATTGGAACAACCGTTTGAGCGACAACGAGCGTCATTTCATTTCGCACGTCCTT 95073 Query 268859 GCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAA 268918 || ||||| || | |||||| || ||||| || || || || ||| ||| | ||| Sbjct 95072 GCTTTTTTCGCCGCCTCTGATGGGATTGTTAATGAGAACCTTGTCGAGC-GTTTTTCCAA 95014 Query 268919 -GAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATAT 268977 || || || | | ||||| | ||||| || || |||||||| || || || || Sbjct 95013 CGAAGTCCAAGCTGCGGAAGCGCGGTGTTTCTATGGTTTCCAGATCATGATGGAGAACAT 94954 Query 268978 TCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGAT----AACAACGAAA 269033 |||||| || | ||| ||| | || || || ||||| | ||| |||| || | Sbjct 94953 TCATTCCGAAACATACTCTCTGCTCATTGACACCTATATCAAGGATCCCCAACAGCGGGA 94894 Query 269034 AGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGG 269092 | | || || | |||| |||| | || || | | || || |||| ||| Sbjct 94893 ACAC----CTCTTCGATGCTATCGAGA-CAATTCCTTGCATCAAGAAGAAGGCTGATTGG 94839 Query 269093 GCTCTGAAATGGAT-------AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTT 269145 || ||| ||||| || ||| | | || || || | | ||||| || Sbjct 94838 GCGCTGCGCTGGATTTCTGACAAGGGAT---GTTCATT-CGCGGAGCGTCTGGTTGCCTT 94783 Query 269146 TGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAA 269205 ||| || || ||||| || |||||||| || || || ||| | || || ||||||||||| Sbjct 94782 TGCTGCAGTCGAAGGGATCTTCTTTTCCGGCTCGTTCGCCTCGATATTCTGGTTGAAGAA 94723 Query 269206 AAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTT 269265 | || |||||||| || || || ||||| |||||| | || ||| | || || || | Sbjct 94722 GCGTGGTCTTATGCCCGGCTTGACGTTCTCGAACGAACTCATTAGCCGCGATGAGGGCAT 94663 Query 269266 ACACTGCGACTTCGCTTGTTTATTATT 269292 ||| |||||||| || |||| || Sbjct 94662 GCACACTGACTTCGCCTGCCTATTGTT 94636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151385698276588