Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq329 105 6e-18 >seq329 Length=122043 Score = 105 bits (116), Expect = 6e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || ||||||| | | ||| || || || ||||||||||| ||||||||||| |||| Sbjct 116585 CCGCCGCGCAGACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAG-A 116643 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || ||||||| |||||||| ||| | |||| | ||| ||||| ||| || Sbjct 116644 AAGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGG 116703 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | ||||||||| ||| ||| ||| | | | || ||||| |||| |||||| Sbjct 116704 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCG--ATGGTGTCGGAAGACTCA 116761 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || || || | || || ||||| |||||||| Sbjct 116762 ACCTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 116811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246779626861