Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq386 107 2e-18 seq329 87.8 2e-12 >seq386 Length=196871 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||||||||| || |||| ||||||||||||||| || Sbjct 173640 GTGGACTCCTTCTGAATGTTATAATCCGACAAAGTGCGACCATCCTCCAGCTGTTTACCA 173581 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | || || ||||| || |||||||| ||||| | ||| || |||||| Sbjct 173580 GCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCTTCCTTGTCTTGAATCTTGGCCTTG 173521 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | | | ||||| | || || || | |||||| || ||||| || | || Sbjct 173520 ACGTTGTCAATCGTGTCCGACGACTCCACCTCTAACGTGATTGTCTTTCCTGTCAACGTC 173461 Query 94991 TTCACAAAGATCTGCATGC 95009 || ||||| |||||||||| Sbjct 173460 TTGACAAAAATCTGCATGC 173442 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| || | ||||| | | || || ||||| ||||| || || || Sbjct 173043 ATCCTCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATGCCCTCCTT 172984 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || |||||||| | ||| ||||||| ||||| |||| ||||| Sbjct 172983 ATCTTGAATCTTAGCCTTGACATTGTCGATCGTGTCAGACGATTCGACCTCAAGGGTGAT 172924 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || |||||||||||||||||||||| Sbjct 172923 CGTCTTCCCTGTGAGCGTTTTCACAAAGATCTGCATGC 172886 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| || ||||| ||||||| | | |||||||| |||||||||||||| || Sbjct 173826 TCTTCCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTA 173767 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| ||| | ||| ||||| | || || || | |||||| Sbjct 173766 TCCTGAATCTTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATA 173707 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || ||||| || |||||||| Sbjct 173706 GTCTTGCCCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 94799 ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| || | || || ||||| || | || ||||| || ||| | |||||| Sbjct 173376 ACCAAGGTGAAGCGTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTC 173317 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| || || | ||||| | | || ||||| || || || ||||| ||||| | Sbjct 173316 CAACTGCTTCCCTGCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTG 173257 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||| ||| | | |||||| | || || || | ||||| || || Sbjct 173256 AATCTTCGCCTTCACGTTATCAATAGTGTCCGACGACTCAACCTCCAGAGTGATCGTCTT 173197 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || |||||||| ||||||||||| Sbjct 173196 GCCAGTCAGTGTTTTCACGAAGATCTGCAT 173167 >seq329 Length=122043 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 94800 CCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 ||||||| | |||| ||||| || | ||||||||| | |||| |||||| | Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || ||| | ||||| | | || ||||| ||||| || ||||| || || | | Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || ||||| || | | | |||||| | || || || | ||| ||||| || | Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || |||||||||||||| Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286375265960