Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq245 107 3e-19 seq602 93.3 7e-15 seq429 80.6 4e-11 >seq245 Length=239850 Score = 107 bits (118), Expect = 3e-19 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| |||||| |||||||||||||||| ||||||||| |||| || | | ||||| Sbjct 28486 GCTATTCGTCGTTTGGCTCGTCGTGGTGGTGTCAAGCGTATCTCGGGTCTCATTTATGAG 28545 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 || | |||| ||| ||||||||||||||| ||| || || | ||| || || || Sbjct 28546 GAAACCCGTGGTGTCTTGAAGATCTTCCTCGAGAATGTCATTCGTGACTCTGTCACTTAC 28605 Query 16607 ACCGAGCACGCTAAACG 16623 ||||||||||| || || Sbjct 28606 ACCGAGCACGCGAAGCG 28622 >seq602 Length=43807 Score = 93.3 bits (102), Expect = 7e-15 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || || ||||| ||||| |||| ||||||||||| || |||||| |||| Sbjct 28378 AGGTATCACTAAACCCGCTATTCGTCGATTGGCCCGTCGTGGTGGTGTAAAGCGTATCTC 28319 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || | | |||||||||| |||| |||| | |||||||||||| Sbjct 28318 CGGTCTCATTTATGAAGAGACCCGTGGTGTTCTCAAGATCTTCCTC 28273 >seq429 Length=37131 Score = 80.6 bits (88), Expect = 4e-11 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || || |||||||||||||||||||| || ||||||||| |||| || | ||||||| Sbjct 25938 GCCATTCGTCGTCTGGCTCGTCGTGGCGGTGTCAAGCGTATCTCGGGTCTCATCTATGAG 25879 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTC 16573 |||| |||| ||| | ||||||||| Sbjct 25878 GAGACCCGTGGTGTCCTCAAGATCTTC 25852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074412781673