Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq545 219 5e-52 seq549 84.2 3e-11 >seq545 Length=209590 Score = 219 bits (242), Expect = 5e-52 Identities = 387/561 (69%), Gaps = 6/561 (1%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 |||||| |||||||| ||||| |||||||| | | || |||||||| ||| |||| Sbjct 96964 CAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGTTCGTTTGAATACGT 96905 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 || || ||||| || |||||||| || ||||| |||||||| ||||| || || || || Sbjct 96904 AAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCGAAAGACCCCGAGAA 96845 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GCTG-TC 33476 ||| || ||||| || |||||||| || | || | ||| || | | ||| || Sbjct 96844 GAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAGGAAGACTGCTTATC 96785 Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 ||||| | |||||||| |||||||| || | |||||| || || || || || Sbjct 96784 GGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAGC 96725 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 | ||||||| | || || || || | ||| ||||||| | ||| ||| Sbjct 96724 GTCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTGATATATGTATCGAGGAGTAGAGAATA 96665 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 | ||||||| || ||||| || || ||||| || ||||||||||| | ||| |||| Sbjct 96664 CGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAACAGCGAGCTTCGGC 96605 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 | ||||||||| | ||||||| || | | ||| || ||||| || ||||| || Sbjct 96604 GACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACGATACCGTCGGAAGC 96545 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 33773 || || || || | |||||| ||||| |||||||| || ||| | | || Sbjct 96544 CGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATCATCATTTAAGCGGTCCTT 96485 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 ||| || || ||| | || | || | ||||| | |||||||| ||||||||||| Sbjct 96484 CCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCAAAAAGATGCCTCTGC 96425 Query 33834 CTTTTTATACATGTTCCAGAT 33854 || || ||||| | ||| || Sbjct 96424 TTTCTTGTACATCTGCCAAAT 96404 Score = 179 bits (198), Expect = 5e-40 Identities = 377/558 (68%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||||| ||||| || | ||||| |||||||| || ||||| | Sbjct 94645 CAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATGAGTTCGTTCGAGAACGTCAAG 94704 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || | ||| ||||| || ||||| || || ||||||||| Sbjct 94705 CCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAGGCGAACGAGCCGGAAAAGAAG 94764 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT-AACCGGCGCTGTCATGT 33480 || ||||| |||||||||||||||| || | ||| | || ||| | ||||| Sbjct 94765 ATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCGAATGAACATCCCTTGTCAGAA 94824 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | |||||||| |||||||| || | ||||| || || || || |||| Sbjct 94825 ATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAAGGAATTGTCTCGATAGCATCG 94884 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| | | | | ||| || | ||| || || || | ||| || || Sbjct 94885 AAGAGGTGTTCCCGCTGTTGGGGATCCTTGATATAGGTGTCAATGAGCAGAGAGTATGTT 94944 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || ||||||||||| || || ||||| || || |||||||| | || || | | Sbjct 94945 TCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGCTTCCGCAGCT 95004 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || ||||| | |||| || || | | || ||||| || || || ||| ||| || Sbjct 95005 TGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCATTAACAATCCCATCAGAGGCGGCG 95064 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCA 33776 ||||| || | || || || |||| |||| || | | | || ||||| Sbjct 95065 AAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGT-TGTCGCTCAAACGGTTGTTCCA 95123 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 ||| | | ||||| || | || ||||| || |||||||| || || || || || || Sbjct 95124 ATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTGTCCAGAAAGAAGCTTCGGCTTT 95183 Query 33837 TTTATACATGTTCCAGAT 33854 || ||||| | |||||| Sbjct 95184 CTTGTACATTTGCCAGAT 95201 >seq549 Length=95171 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 63228 AAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286 || |||||||||||||| || || ||| |||||||| | || | | |||||| || || Sbjct 69648 AAAAGATCAGGAATCCAGAGCGC-ATAGAATAGATCCCGGGCACGAACTTCCTCCTTACC 69590 Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346 |||||| |||||| | |||| | | |||||| |||||||| |||| |||||| Sbjct 69589 GTGATTCTTGCGAAGATCCAAGAACTCGAAGATATCATCGTGCCACGGCTCCAGGTATAT 69530 Query 63347 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63406 ||| | | || || || ||||| || || || || | || | ||||| || || Sbjct 69529 GGCAAACGCGCCCGGACGCTTGTTACCACCTTGGTCCACATACCGTGCGGTTGCATCGTA 69470 Query 63407 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63451 | | | ||| || | |||||| || || || |||||||| Sbjct 69469 CGCACGGAGCATAGGGACAATACCATTCGAGTAGCCGTTGGTACC 69425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940495530760