Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq610 140 2e-28 seq329 125 5e-24 seq253 125 5e-24 seq386 114 9e-21 >seq610 Length=3516 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3287 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3228 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3227 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3193 >seq329 Length=122043 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||| | |||||| || |||||||||||||| ||||| ||||| ||||| Sbjct 116585 CCGCCGCGCAGACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 116644 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | |||| |||| || | || || |||||||| || || ||||| || || | ||| Sbjct 116645 AGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGA 116704 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| ||| || |||||| || | || || || | ||||| Sbjct 116705 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACC 116764 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | |||||||| || |||||||| || || || || |||||||| Sbjct 116765 TCGAGGGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 116811 >seq253 Length=49013 Score = 125 bits (138), Expect = 5e-24 Identities = 198/280 (71%), Gaps = 13/280 (5%) Strand=Plus/Minus Query 6234 AAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCT 6293 ||| ||||||| ||||| || ||||| ||||| || || |||||| | || ||||| Sbjct 5379 AAGATCGAGGGCAAGGGCAATGGTATAAAAACGGTTGTTCCGAACATGGCCGATGTCGCC 5320 Query 6294 AAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCT 6353 |||||| | ||||| ||||||| || ||||||| || || ||||| || |||||| Sbjct 5319 CGGGCGCTGAGCCGCCCGCCCACCTATCCCACGAAATTCTTTGGCTGCGAGCTCGGCGCT 5260 Query 6354 CAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCC 6413 ||||| ||| || | || ||||| || | ||| || ||||| | ||| | | | Sbjct 5259 CAGACTTCGTTCGACGAGAAGAACGATCGTTACATTGTCAACGGTGCTCATGATGCGACG 5200 Query 6414 AAGCTGCAGGACTTACTTGACGGCTTTATTCG-CAAGTTTGTGCTGTG----TCGGGAAT 6468 ||||||| || | || ||| ||||| ||| |||||| || ||||| ||| | Sbjct 5199 AAGCTGCGTGAACTTCTCGAC-GCTTTCATCGACAAGTTCGTACTGTGCAAATCG----T 5145 Query 6469 GCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAG 6508 || | ||||| ||||| || ||||| | ||||||||| Sbjct 5144 GCAAAAACCCCGAGACGGATCTTATCAT---TACCAAGAG 5108 >seq386 Length=196871 Score = 114 bits (126), Expect = 9e-21 Identities = 155/213 (73%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 38108 CACCAA-ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGT 38166 |||||| |||||||||| ||| || |||||||||||||| |||| | |||| | Sbjct 173882 CACCAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTT 173823 Query 38167 CTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCA 38226 | ||||| ||||| ||||| || ||||| || ||||||| || | ||||| || ||| Sbjct 173822 CCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCT 173763 Query 38227 TAATTTTTTGCTTCACATTCTGGACAGTATCT--CCACTTTCAACTTCTAATGTAATAGT 38284 ||| || |||||| || | || || ||| | || ||||| || | || ||||| Sbjct 173762 GAATCTTGGCCTTCACGTTGTCGATCGTGTCTGACGAC--TCAACCTCCAGCGTGATAGT 173705 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| | || |||||||| |||||||| Sbjct 173704 CTTGCCCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| || |||||| |||||||||||||| |||||| || | || || || || Sbjct 173369 TGAAGCGTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGC 173310 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || || || |||||||| | ||||| ||||| ||||| ||| || Sbjct 173309 TTCCCTGCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTC 173250 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTT-TCAACTTCTAATGTAATAGTTTTACCCGT 38293 |||||| || | | ||| || | || ||||| || | || || || || || || Sbjct 173249 GCCTTCACGTTATCAATAGTGTC-CGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGT 173191 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 || ||||||||||| |||||||| Sbjct 173190 CAGTGTTTTCACGAAGATCTGCAT 173167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943685252491