Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq386 123 2e-23 seq329 84.2 2e-11 >seq386 Length=196871 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || | ||||| | || ||||||||||| Sbjct 173444 ATGCAGATTTTTGTCAAGACGTTGACAGGAAAGACAATCACGTTAGAGGTGGAGTCGTCG 173503 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| | || || | ||| ||||| ||||| || || || || Sbjct 173504 GACACGATTGACAACGTCA---AGGCCAAGATTCAA-GACAAGGAAGGTATCCCGCCAGA 173559 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| |||| ||||| || ||||| | || |||| ||||||| || ||||| Sbjct 173560 CCAACAGCGTCTTATCTTTGCTGGTAAACAGCTGGAGGATGGTCGCACTTTGTCGGATTA 173619 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 || ||||| || || |||||||| || Sbjct 173620 TAACATTCAGAAGGAGTCCACGCTTCA 173646 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || |||| || || | ||||| | || || |||||||| Sbjct 173167 ATGCAGATCTTCGTGAAAACACTGACTGGCAAGACGATCACTCTGGAGGTTGAGTCGTCG 173226 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || | || ||||| | || | ||| ||||| ||||| || || ||||| | Sbjct 173227 GACACTATTGA-TAACGTGAAGGCGAAGATTCAA-GACAAGGAAGGAATCCCCCCTGATC 173284 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || || || || || || |||| || ||| || ||||||| Sbjct 173285 AACAGCGTCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGCCGAACTTTGTCGGATTACA 173344 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 ||||||| || || || ||||| || Sbjct 173345 ATATTCAGAAGGAGTCGACGCTTCA 173369 Score = 102 bits (112), Expect = 7e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| | || || |||||||| Sbjct 173672 ATGCAGATTTTCGTGAAGACGCTTACGGGCAAGACTATCACGCTGGAGGTTGAGTCGTCA 173731 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| || || ||||| ||||| || || || Sbjct 173732 GACACGATCGACAACGTGAAGGCCAAGATTCAG-GATAAGGAAGGTATTCCTCCCGATCA 173790 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||| ||||| || || ||||| ||||| | | || || |||||||| Sbjct 173791 GCAGCGCCTTATCTTTGCTGGAAAGCAATTGGAAGACGGGAGGACGCTGTCGGATTACAA 173850 Query 25178 TATTCAAAAAGAATCCACGCTACAT 25202 |||||| ||||| ||||| || ||| Sbjct 173851 TATTCAGAAAGAGTCCACTCTTCAT 173875 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || || | ||||| | || || || |||||| Sbjct 172888 ATGCAGATCTTTGTGAAAACGCTCACAGGGAAGACGATCACCCTTGAGGTCGAATCGTCT 172947 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || | || || | ||| || || || || |||||||| ||| Sbjct 172948 GACACGATCGA--CAATGTCAAGGCTAAGATTCAA-GATAAGGAGGGCATTCCACCAGAC 173004 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || || |||||||| | || |||| ||| || || || ||| Sbjct 173005 CAACAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGATGGTCGTACATTGTCAGACTAC 173064 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| || ||||| || Sbjct 173065 AACATCCAGAAAGAGTCAACGCTTCA 173090 >seq329 Length=122043 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || | || || |||| || ||||| || Sbjct 116811 ATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTTCC 116752 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 116751 GACACCATCGACAACGTGAAGGCGAAGATTCAG-GACAAGGAGGGCATTCCCCCGGACCA 116693 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | ||||||||||| || || | || || | || || | || ||||| Sbjct 116692 GCAACGTCTCATTTTTGCCGGGAAGCAGCTTGAGGACGGACGTACCCTTTCTGACTACAA 116633 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||| || || || ||||| Sbjct 116632 CATTCAGAAGGAGAGCACTCTCCACTTGGTGCT 116600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323452899715