Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq386 118 9e-22 seq329 104 2e-17 >seq386 Length=196871 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || || || || || || |||| | || ||||| | | Sbjct 173444 ATGCAGATTTTTGTCAAGACGTTGACAGGAAAGACAATCACGTTAGAGGTGGAGTCGTCG 173503 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || |||||||||||||| ||||| || || || ||| Sbjct 173504 GACACGATTGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCGCCAGACCAA 173563 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || |||||| | |||||| ||||| | || ||||| ||| Sbjct 173564 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAGGATGGTCGCACTTTGTCGGATTATAAC 173623 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| | || | ||| | || | ||||| ||| Sbjct 173624 ATTCAGAAGGAGTCCACGCTTCACCTCGTTCTCCGTCTCCGCGGTGGT 173671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || ||| ||||||| || || || | | Sbjct 173167 ATGCAGATCTTCGTGAAAACACTGACTGGCAAGACGATCACTCTGGAGGTTGAGTCGTCG 173226 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || |||||||||||||| || || || || |||||| Sbjct 173227 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGAATCCCCCCTGATCAA 173286 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||||| |||||| ||| || | || |||||||| Sbjct 173287 CAGCGTCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGCCGAACTTTGTCGGATTACAAT 173346 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 173347 ATTCAGAAGGAGTCGAC 173363 >seq329 Length=122043 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| || ||| |||| || || || || | | Sbjct 117091 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATCACGCTGGAGGTTGAGTCTTCT 117032 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| || || ||||||||||| |||||||| || || || Sbjct 117031 GACACAATTGATAACGTGAAAGCGAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 116972 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || |||||||| | || ||| |||||| | |||||||| ||| Sbjct 116971 CAGCGTCTTATCTTCGCTGGCAAACAACTCGAAGATGGTCGCACCCTGTCCGATTATAAC 116912 Query 22399 ATTCAAAAAGAA 22410 || || || ||| Sbjct 116911 ATCCAGAAGGAA 116900 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || | || || || || || | || Sbjct 116811 ATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTTCC 116752 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || ||||| ||||||||||| ||||| || || || Sbjct 116751 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 116692 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| || ||| | ||||| || ||| | || || |||||| Sbjct 116691 CAACGTCTCATTTTTGCCGGGAAGCAGCTTGAGGACGGACGTACCCTTTCTGACTACAAC 116632 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || ||| | || || || | || ||||||| || Sbjct 116631 ATTCAGAAGGAGAGCACTCTCCACTTGGTGCTTCGTCTGCGCGGCGG 116585 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || | || | || || ||| | || Sbjct 117373 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACCATTACGTTGGAGGTTGAATCTTCC 117314 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || || ||||| || || || ||||||||| Sbjct 117313 GACACTATTGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGCATACCTCCCGATCAA 117254 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||||| | || ||||| ||| Sbjct 117253 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTATAAC 117194 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 117193 ATTCAGAAGGA 117183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723595610465