Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq386 82.4 6e-11 seq329 82.4 6e-11 >seq386 Length=196871 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/97 (79%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 33918 CACCA-GATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGT 33976 ||||| ||||||| ||| ||| |||||||| |||||||| | || | | |||| | Sbjct 173882 CACCAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTT 173823 Query 33977 CCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||||||||| || ||||| || |||||||||||||| Sbjct 173822 CCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATC 173786 >seq329 Length=122043 Score = 82.4 bits (90), Expect = 6e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || ||||||| || || ||||||||||||||||||||||| || | Sbjct 116585 CCGCCGCGCAGACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAG-A 116643 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || |||| || | ||||| |||||||| || || || ||||| ||| || Sbjct 116644 AAGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGG 116703 Query 34020 CACGCTCTCTTTGTCCATAATTTT 34043 | || ||| |||||| ||| || Sbjct 116704 AATGCCCTCCTTGTCCTGAATCTT 116727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397058233450522