Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq545 109 1e-18 seq536 89.7 1e-12 seq318 84.2 5e-11 >seq545 Length=209590 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 243553 CCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCC 243612 || ||| ||| || ||||||||||| | ||| ||| | || |||||||| ||||| || Sbjct 94489 CCCTGCGCGCTGATCGGCATGAACTCGGGACTAATGTGTCAATACATCGAGTTCGTGGCG 94430 Query 243613 GACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCC 243672 || ||| | || | || | || | |||| |||| ||| | || ||||| | Sbjct 94429 GATCGCCTGCTCGTTGCTTTGGGCGACTCGAAAATGTATGGCTCGACAAATCCCTTCGAT 94370 Query 243673 TTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGAT 243732 || ||||| | ||||||||||||||||| ||||| |||||||| ||||| ||| |||| Sbjct 94369 TTCATGGACATGATTTCGCTTCAAGGGAAGACTAATTTCTTCGAGAAGCGGGTCTCTGAT 94310 Query 243733 TAT 243735 ||| Sbjct 94309 TAT 94307 >seq536 Length=346962 Score = 89.7 bits (98), Expect = 1e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 68401 TTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAA 68460 ||| ||| || ||| | |||||| |||| |||||||| || | || |||| |||| Sbjct 161413 TTTACCAGGCATCTACTTCAGAGCTGTACGGAAAAGTCGTGGAGACGCCGCAGAGCGAAA 161472 Query 68461 ATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCT 68520 |||||| || || || || || || ||||| || ||| | || || || |||||| Sbjct 161473 CTACTCCCTTCTACCCACGCTCGCCATATGGTGTCGCGAAGCTTTATGCGTACTGGATCA 161532 Query 68521 GTAAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACG 68580 ||||| || ||| |||| ||||||| |||||| |||| |||||||||| Sbjct 161533 CAGTCAATTATCGCGAGGCGTACGGGATGTATGCTTGCAACGGGATTCTGTTCAATCACG 161592 Query 68581 AGAGTCC 68587 ||||||| Sbjct 161593 AGAGTCC 161599 >seq318 Length=145970 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 59870 TTTGAGGGTGCGTTGAAACTCAAAGAAATCTCGTATATTCACGCAGAGGGGTTCCTGGGA 59929 || ||||||||| | || ||||||||||||||||||| ||| | ||||| |||| | Sbjct 28797 TTAGAGGGTGCGCTCAAGATCAAAGAAATCTCGTATATGCACTCGGAGGGTATCCTCGCT 28738 Query 59930 GGCGAGTTGAAACACGGTCCCCTCGCACTCCTCGACGATAAAATCCCCGTCATC 59983 || || | || |||||||||||||| | ||||||| || || || || ||| Sbjct 28737 GGAGAACTCAAGCACGGTCCCCTCGCGTTGATCGACGAGAACATGCCAGTGATC 28684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102867833510350