Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30]
861 sequences; 28,378,039 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq386 98.7 9e-16
seq329 96.9 3e-15
seq281 89.7 5e-13
seq549 82.4 7e-11
>seq386
Length=196871
Score = 98.7 bits (108), Expect = 9e-16
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975
||| |||||||| || || ||||| || || || ||| ||| || |||||||| ||
Sbjct 173085 CGTTGACTCTTTCTGGATGTTGTAGTCTGACAATGTACGACCATCCTCCAGCTGTTTGCC 173026
Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035
|||| |||| | ||||| || || || || ||||||||||| || || || |||
Sbjct 173025 AGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATCTTAGCCTT 172966
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
|| | |||| ||||| | ||||| || | ||| | ||| || || || || ||
Sbjct 172965 GACATTGTCGATCGTGTCAGACGATTCGACCTCAAGGGTGATCGTCTTCCCTGTGAGCGT 172906
Query 127096 TTTTACAAAAATCTGCATG 127114
||| ||||| |||||||||
Sbjct 172905 TTTCACAAAGATCTGCATG 172887
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/212 (71%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 126904 CACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962
|||||| ||| | || |||||||| |||||||||||||| || ||| | || |
Sbjct 173882 CACCAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTT 173823
Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022
| | || |||||||| |||| | ||||||||||||||||| || || ||||| |||
Sbjct 173822 CCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCT 173763
Query 127023 TGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081
|| || ||| | ||||| ||| ||||| | ||| || || | || | ||
Sbjct 173762 GAATCTTGGCCTTCACGTTGT-CGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTC 173704
Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| || || || || || |||||||||||
Sbjct 173703 TTGCCCGTAAGCGTCTTCACGAAAATCTGCAT 173672
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975
||| ||||| || |||||||||||||| || || || ||| || | ||| || ||
Sbjct 173364 CGTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGCTTCCC 173305
Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035
||| |||||| ||||| ||||| || || || || |||||||| || ||| |||
Sbjct 173304 TGCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTCGCCTT 173245
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| | || | ||||||| ||| || || | || | ||| ||||| ||||| ||
Sbjct 173244 CACGTTATCAATAGTGTCCGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGTCAGTGT 173185
Query 127096 TTTTACAAAAATCTGCAT 127113
||| || || ||||||||
Sbjct 173184 TTTCACGAAGATCTGCAT 173167
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | || | || | ||| ||||| || ||||| || ||||| |
Sbjct 173670 CCACCGCGGAGACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCCGAC 173611
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || |||||||| ||||| |||| | ||||| || || || ||
Sbjct 173610 AAAGTGCGACCATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGG 173551
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| || || ||||| ||||| | | ||||||| ||| ||
Sbjct 173550 ATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGT-CAATCGTGTCCGACGACTCCAC 173492
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | || || || |||| || || |||||||||||||||
Sbjct 173491 CTCTAACGTGATTGTCTTTCCTGTCAACGTCTTGACAAAAATCTGCATG 173443
>seq329
Length=122043
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 126906 CCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTA 126965
|||| || | ||| ||| || ||||| || ||||| | |||||| ||| || |
Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225
Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025
|||| || || ||| |||| | ||||| ||||||||||||||||| ||||| ||| ||
Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285
Query 127026 TTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGC 127085
| ||| ||| | | || | ||||| | | || || || | || | || ||||
Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345
Query 127086 CGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||| || || ||||| ||||||||
Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373
>seq281
Length=84010
Score = 89.7 bits (98), Expect = 5e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| |||| ||| ||||| || ||||||||||| |||| | |||||| ||| ||
Sbjct 66204 ACCAAGTGTAGCGTCGACTCCTTCTGAATATTGTAGTCGCTGAGGGTGCGACCATCCTCA 66263
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTAT 127008
||||| |||||||| |||||||||| ||||| || || || ||
Sbjct 66264 AGCTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGGGGGAT 66307
>seq549
Length=95171
Score = 82.4 bits (90), Expect = 7e-11
Identities = 193/284 (68%), Gaps = 13/284 (5%)
Strand=Plus/Minus
Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778
||| || ||||| || | || || ||||| || ||||||||||||||||| || ||
Sbjct 71052 GTCAACCGTGAATTGGATGGCCTGCGCGGCTGGACGCGTGCGCAGATAGTACATCCCAGT 70993
Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA-TGACCGAGTACGTGGGT- 145836
||| | | ||||| ||| |||||||| || || | || | | |||| ||| |||
Sbjct 70992 CTTTAACCCTTTCTTCCAGCCATAAAAGTGCATACTGGTCAGTTGCGGAGT-CGTAGGTG 70934
Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896
| || | | | ||| ||| ||| |||||| |||||| | | | || ||||| |||
Sbjct 70933 ACTGC-AGATGGACATTGAGACTTTGACTCTGACAAATGAAGGCACCTCGATCGGCAGCC 70875
Query 145897 ATGTCTATCATGCACTTTGATT----TAATTTCCCATGCGGTTTTAAAGAGATCCTTGAC 145952
| ||||| | ||||| || | || ||||| | || || ||| | ||||||
Sbjct 70874 A----TATCAAGAACTTTCTTTTGGCTGATCTCCCAAACTGTCTTGTAGATAGCCTTGAT 70819
Query 145953 GTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATT-TTCG 145995
| | || || || ||||||||||| |||||||| ||||
Sbjct 70818 ATCATCAGGAATACCGGAGATGTTCTGCACGGACCCATTGTTCG 70775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475495682422640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |