Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq386 98.7 9e-16 seq329 96.9 3e-15 seq281 89.7 5e-13 seq549 82.4 7e-11 >seq386 Length=196871 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| |||||||| || || ||||| || || || ||| ||| || |||||||| || Sbjct 173085 CGTTGACTCTTTCTGGATGTTGTAGTCTGACAATGTACGACCATCCTCCAGCTGTTTGCC 173026 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| |||| | ||||| || || || || ||||||||||| || || || ||| Sbjct 173025 AGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATCTTAGCCTT 172966 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | |||| ||||| | ||||| || | ||| | ||| || || || || || Sbjct 172965 GACATTGTCGATCGTGTCAGACGATTCGACCTCAAGGGTGATCGTCTTCCCTGTGAGCGT 172906 Query 127096 TTTTACAAAAATCTGCATG 127114 ||| ||||| ||||||||| Sbjct 172905 TTTCACAAAGATCTGCATG 172887 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 126904 CACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962 |||||| ||| | || |||||||| |||||||||||||| || ||| | || | Sbjct 173882 CACCAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTT 173823 Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022 | | || |||||||| |||| | ||||||||||||||||| || || ||||| ||| Sbjct 173822 CCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCT 173763 Query 127023 TGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 || || ||| | ||||| ||| ||||| | ||| || || | || | || Sbjct 173762 GAATCTTGGCCTTCACGTTGT-CGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTC 173704 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || || || ||||||||||| Sbjct 173703 TTGCCCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || |||||||||||||| || || || ||| || | ||| || || Sbjct 173364 CGTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGCTTCCC 173305 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| |||||| ||||| ||||| || || || || |||||||| || ||| ||| Sbjct 173304 TGCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTCGCCTT 173245 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | || | ||||||| ||| || || | || | ||| ||||| ||||| || Sbjct 173244 CACGTTATCAATAGTGTCCGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGTCAGTGT 173185 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 173184 TTTCACGAAGATCTGCAT 173167 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | || | ||| ||||| || ||||| || ||||| | Sbjct 173670 CCACCGCGGAGACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCCGAC 173611 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||| ||||| |||| | ||||| || || || || Sbjct 173610 AAAGTGCGACCATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGG 173551 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||||| ||||| | | ||||||| ||| || Sbjct 173550 ATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGT-CAATCGTGTCCGACGACTCCAC 173492 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || || || |||| || || ||||||||||||||| Sbjct 173491 CTCTAACGTGATTGTCTTTCCTGTCAACGTCTTGACAAAAATCTGCATG 173443 >seq329 Length=122043 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 126906 CCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTA 126965 |||| || | ||| ||| || ||||| || ||||| | |||||| ||| || | Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025 |||| || || ||| |||| | ||||| ||||||||||||||||| ||||| ||| || Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 127026 TTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGC 127085 | ||| ||| | | || | ||||| | | || || || | || | || |||| Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345 Query 127086 CGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||| || || ||||| |||||||| Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373 >seq281 Length=84010 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| |||| ||| ||||| || ||||||||||| |||| | |||||| ||| || Sbjct 66204 ACCAAGTGTAGCGTCGACTCCTTCTGAATATTGTAGTCGCTGAGGGTGCGACCATCCTCA 66263 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTAT 127008 ||||| |||||||| |||||||||| ||||| || || || || Sbjct 66264 AGCTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGGGGGAT 66307 >seq549 Length=95171 Score = 82.4 bits (90), Expect = 7e-11 Identities = 193/284 (68%), Gaps = 13/284 (5%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||| || ||||| || | || || ||||| || ||||||||||||||||| || || Sbjct 71052 GTCAACCGTGAATTGGATGGCCTGCGCGGCTGGACGCGTGCGCAGATAGTACATCCCAGT 70993 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA-TGACCGAGTACGTGGGT- 145836 ||| | | ||||| ||| |||||||| || || | || | | |||| ||| ||| Sbjct 70992 CTTTAACCCTTTCTTCCAGCCATAAAAGTGCATACTGGTCAGTTGCGGAGT-CGTAGGTG 70934 Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896 | || | | | ||| ||| ||| |||||| |||||| | | | || ||||| ||| Sbjct 70933 ACTGC-AGATGGACATTGAGACTTTGACTCTGACAAATGAAGGCACCTCGATCGGCAGCC 70875 Query 145897 ATGTCTATCATGCACTTTGATT----TAATTTCCCATGCGGTTTTAAAGAGATCCTTGAC 145952 | ||||| | ||||| || | || ||||| | || || ||| | |||||| Sbjct 70874 A----TATCAAGAACTTTCTTTTGGCTGATCTCCCAAACTGTCTTGTAGATAGCCTTGAT 70819 Query 145953 GTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATT-TTCG 145995 | | || || || ||||||||||| |||||||| |||| Sbjct 70818 ATCATCAGGAATACCGGAGATGTTCTGCACGGACCCATTGTTCG 70775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495682422640