Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq545 196 5e-45 seq549 86.0 7e-12 >seq545 Length=209590 Score = 196 bits (216), Expect = 5e-45 Identities = 392/576 (68%), Gaps = 5/576 (1%) Strand=Plus/Minus Query 18943 AGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAAT 19002 ||||| | | | | |||||| || |||||| || | |||||||| | | |||| | Sbjct 96978 AGATGGTGATAAAGCAAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGT 96919 Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062 || || ||| | || | ||||||||| || || | || || | ||||||||| || || Sbjct 96918 TCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCG 96859 Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122 || || || || |||||||||||||| || || |||||||| || || | |||| || | Sbjct 96858 AAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAG 96799 Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGC 19182 || | |||| ||||| | |||||||| |||||||| || | ||| || Sbjct 96798 GAAGACTGCTTATCGGCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGT 96739 Query 19183 ATTGTCTCTATAGAATTAAATAGATACATACGCT-CATCTGTATCTTTAACATATGCATC 19241 || ||||| |||| | || |||| | || | | |||| || || | ||||| ||| Sbjct 96738 ATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTGCTTCTG-GTCCTTGATATATGTATC 96680 Query 19242 TATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAA 19301 | | || | ||| |||| || || || || ||||| ||||| || ||||| || Sbjct 96679 GAGGAGTAGAGAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAA 96620 Query 19302 ACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAAC 19361 ||| | ||||| | | ||||||||| | |||||| ||||| | ||| || || || Sbjct 96619 ACAGCGAGCTTCGGCGACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCAC 96560 Query 19362 TATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGA 19421 || || || ||| || || || || | |||||| ||||| | ||||||||| Sbjct 96559 GATACCGTCGGAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATCATC 96500 Query 19422 GGTTAA--TGT-ATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCA 19478 |||| || ||||| || | ||| | || | || | ||||| | ||||| Sbjct 96499 ATTTAAGCGGTCCTTCCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCA 96440 Query 19479 AAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 |||||| ||||||||||| || ||||| | ||| || Sbjct 96439 AAAAGATGCCTCTGCTTTCTTGTACATCTGCCAAAT 96404 Score = 183 bits (202), Expect = 3e-41 Identities = 367/538 (68%), Gaps = 7/538 (1%) Strand=Plus/Plus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| || | || || | ||| || || || || || || ||||| || || | || Sbjct 94666 CCCTCATCGCGGCTAATGAGTTCGTTCGAGAACGTCAAGCCGGGCATAAGACCACGCTTC 94725 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||||||||| || || || || || |||||||| || ||||| ||||| ||||| Sbjct 94726 TTCAACCAGAATATCGAGGCGAACGAGCCGGAAAAGAAGATCCCTTCGACTGCAGCAAAG 94785 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCAT-CATTATTATGAATCCATTTCAGTGCCCAATC 19160 ||||| || | || | || | ||| | || | | |||||| ||| |||||||| Sbjct 94786 GCAACCAGACGCTC-CGCGAATGAACATCCCTTGTCAGAAATCCAGCGCAGCGCCCAATC 94844 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATC 19220 ||||||||| || | || || |||||||| |||| || || || | |||| | Sbjct 94845 AGCCTTCTTCTTGATGCAAGGAATTGTCTCGATAGCATCGAAGAGGTGTTCCCGCTGTTG 94904 Query 19221 TGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | ||| || | ||| | || || | | | ||| |||| |||||||| || || || Sbjct 94905 GGGATCCTTGATATAGGTGTCAATGAGCAGAGAGTATGTTTCGGAATGAATGTTCTCCAT 94964 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 ||||| || || || ||||| | ||||| | || ||||| | |||| | Sbjct 94965 CATGATCTGGAAACCATAGAAACACCGCGCTTCCGCAGCTTGGACTTCGTTGGAAAAACG 95024 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 ||||| | || |||||||| || |||||| || || ||||| || | || || Sbjct 95025 CTCGACAAGGTTCTCATTAACAATCCCATCAGAGGCGGCGAAAAAAGCAAGGACGTGCGA 95084 Query 19401 AATAAAATGTTTTTCATCTGAGGTT--AATG--TATTCCAATCATTAATATCTTTAGATA 19456 ||| ||||| || | || | | || | | |||||||| | || ||||| || | Sbjct 95085 AATGAAATGACGCTCGT-TGTCGCTCAAACGGTTGTTCCAATCGTGAAAGTCTTTCGACA 95143 Query 19457 AATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 | || ||||| ||||||||||| |||||||| || ||||| || ||||| | ||| || Sbjct 95144 AGTCGACTTCCTCAACTGTCCAGAAAGAAGCTTCGGCTTTCTTGTACATTTGCCAGAT 95201 >seq549 Length=95171 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 || || | ||| ||||| ||||||||||| ||| |||| ||||| || |||||||| Sbjct 71015 GTGCGCAGATAGTACATCCCAGTCTTTAACCCTTTCTTCCAGCCATAAAAGTGCATACTG 70956 Query 47073 GTTAATTTAGAATAACTAGGT-TCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | || | | ||||| ||| | ||| | ||| ||| |||||||||| ||| Sbjct 70955 GTCAGTTGCGGAGTCGTAGGTGACTG-CAGATGGACATTGAGACTTTGACTCTGACAAAT 70897 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 || ||||||| ||| || |||||||| | || | |||| |||||||| ||||| Sbjct 70896 GAAGGCACCTCGATCGGCAGCCATATCAAGAACTTTCTTTTGGCTGATCTCCCAAACTGT 70837 Query 47192 TTTATAAAT 47200 || || || Sbjct 70836 CTTGTAGAT 70828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562102750304040