Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq438 102 7e-16 seq299 96.9 3e-14 seq386 93.3 3e-13 >seq438 Length=104984 Score = 102 bits (112), Expect = 7e-16 Identities = 135/185 (73%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 550399 TGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGC 550458 |||||| | ||||| || || ||||| || ||||| || || || || || |||||||| Sbjct 30857 TGCAGTTGTCACTGTGCCTGCCTATTTCAACGACTCGCAGCGCCAGGCCACAAAAGATGC 30798 Query 550459 TGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 || ||| || ||||||| || || || || || |||||||| || ||||||||||| Sbjct 30797 GGGCACG-ATCTCTGGACTCAACGTCCTCCGAATCATCAATGAGCCGACTGCTGCTGCGA 30739 Query 550518 TTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTG 550577 |||| || || ||||| ||| | | || || | || || |||||||| || | | Sbjct 30738 TTGCGTACGGTCTTGACAAAAAGACTGTAGGCGAGCGCAACGTCCTCATCTTCGACTTGG 30679 Query 550578 GAGGT 550582 ||||| Sbjct 30678 GAGGT 30674 >seq299 Length=42093 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| || || || || ||||| | ||||| ||||| || || || | Sbjct 33824 ATGCTGTTGTTACTGTTCCTGCCTACTTCAATGATGCGCAACGGCAAGCCACCAAGGACG 33765 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || | ||||| || ||| |||| |||||| | ||||| || || ||||||||||||| Sbjct 33764 CAGGTCAAATTGCAGGCCTTGATGTCCTTCGTGTAATCAACGAGCCAACTGCTGCTGCAC 33705 Query 550518 TTGCATATGGACTTGA 550533 | ||||| || ||||| Sbjct 33704 TGGCATACGGCCTTGA 33689 >seq386 Length=196871 Score = 93.3 bits (102), Expect = 3e-13 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||||||||| || ||||| |||||||||||| | || || || ||||| | Sbjct 173879 CAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTTCCA 173820 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 ||| ||||| ||||| ||||| | |||||||| |||||||| ||||| ||||| |||| Sbjct 173819 ATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCTGAA 173760 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTA 563445 | || || || || || || || | || | | || || || | ||| || Sbjct 173759 TCTTGGCCTTCACGTTGTCGATCGTGTCTG-ACGACTCAACCTCCAGCGTGATAGTCTTG 173701 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || ||||| || || |||||||| |||||| Sbjct 173700 CCCGTAAGCGTCTTCACGAAAATCTGCATA 173671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029250466436890