Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq543 105 5e-18 >seq543 Length=87092 Score = 105 bits (116), Expect = 5e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGC-CCTCATGTCCGTGTACTCTGCTCCGAA 30173 ||||||||||| || || | ||| ||||| | || ||| ||||||| || ||||| Sbjct 57190 AGCTGATCCACGCCTTGTCCGGTGTAATCTGCGTCGCA-GTCTGTGTACTGCGCGCCGAA 57248 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 ||| ||||| ||||| || || | ||||| |||||||| ||| || || | | || Sbjct 57249 ATGTCTCCATTGGAATCCATATATTGGTCCGAGGTCTCCTTCTCGCCGATGGCCTAGCCC 57308 Query 30234 CCTCTTGTCCA-AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGG 30292 ||||| |||| ||||| || | ||||| ||||||||||||| | ||||| | | Sbjct 57309 TCTCTTCTCCAGAAAAGCCT-TACTCCCGTTACCGTCCCAGATCTTGATGCCCTTGGCAG 57367 Query 30293 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 |||| ||||||| ||| || || | |||||| || |||||||| Sbjct 57368 AGAGTATATTGGAGTCTGTCGATCCATGAATGAACCATAGGAGCTCCTC 57416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408613312196753