Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq329 131 1e-25 seq386 118 8e-22 >seq329 Length=122043 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | |||||| || || |||||||| || ||||| ||||| ||||| Sbjct 116585 CCGCCGCGCAGACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 116644 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| |||||||| || || || || || |||| |||| Sbjct 116645 AGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGA 116704 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || || | | | || || | ||| ||| Sbjct 116705 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACC 116764 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || ||||||||||| || || ||||| |||||||| Sbjct 116765 TCGAGGGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 116811 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 |||| || || || ||||| || ||||| || |||||||| ||| | ||| | || || | Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 |||||| ||||| || || || ||||||||||| | || | ||| ||||| || | Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 48679 TCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTC 48738 |||| || ||| | | || || || | || ||||||| |||||| || || | Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345 Query 48739 CCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||| || || ||||| |||||||| Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373 >seq386 Length=196871 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || |||||||||||||| || | | |||| | || ||||||||| Sbjct 173369 TGAAGCGTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGC 173310 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || ||||| ||||||||||| | ||| | || |||||||| |||||| Sbjct 173309 TTCCCTGCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTC 173250 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || || |||| ||| ||||||| || ||||| || || ||| Sbjct 173249 GCCTTCACGTTATCAATAGTGTCCGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGTC 173190 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | ||||| || || |||||||| Sbjct 173189 AGTGTTTTCACGAAGATCTGCAT 173167 Score = 107 bits (118), Expect = 1e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 48557 CACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGT 48615 |||||| ||| || ||| |||||| |||||||||||||| || || | | |||| | Sbjct 173882 CACCAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTT 173823 Query 48616 CCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGC 48675 |||| ||||| || ||||| || || ||||| ||||| | |||| || ||||| || Sbjct 173822 CCAATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCT 173763 Query 48676 TAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTT 48735 |||||| || || | | | ||||||| ||| ||||||| ||| || || | Sbjct 173762 GAATCTTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTCT 173703 Query 48736 TTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | ||||| | || || || ||||||||||| Sbjct 173702 TGCCCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || |||||| ||| || ||||| || ||||| || | | | ||| | || |||| ||| Sbjct 173646 TGAAGCGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTGCGACCATCCTCCAGCTGT 173587 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||| ||||| || || |||||||| || | || | || |||||||| |||||| Sbjct 173586 TTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCTTCCTTGTCTTGAATCTTG 173527 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || |||| ||||||||| | ||| || || ||||| ||| Sbjct 173526 GCCTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCTAACGTGATTGTCTTTCCTGTC 173467 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || |||||||||||||| Sbjct 173466 AACGTCTTGACAAAAATCTGCAT 173444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380933602655103