Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq386 95.1 8e-14 seq329 95.1 8e-14 >seq386 Length=196871 Score = 95.1 bits (104), Expect = 8e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||||||||| || ||||| || ||| ||||| | || || || ||||| | Sbjct 173879 CAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTTCCA 173820 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||||||||||| ||||| || || ||||| |||||||| |||||||| || |||| Sbjct 173819 ATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCTGAA 173760 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| || || || || || || | | | || || || || ||||| || Sbjct 173759 TCTTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAA-CCTCCAGCGTGATAGTCTTG 173701 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| |||||||| || Sbjct 173700 CCCGTAAGCGTCTTCACGAAAATCTG 173675 Score = 86.0 bits (94), Expect = 4e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| || || ||||| || || || || |||||||| | | ||| Sbjct 173664 CGGAGACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTG 173605 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||| || || || || |||||||| |||||||| ||||| || || || || ||| Sbjct 173604 CGACCATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCT 173545 Query 480672 TCCTTGTCTTGAATCTT 480688 ||||||||||||||||| Sbjct 173544 TCCTTGTCTTGAATCTT 173528 >seq329 Length=122043 Score = 95.1 bits (104), Expect = 8e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 480567 AGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGT 480626 || ||||| || ||||| || | |||||||| | || || | |||||| ||| Sbjct 116886 AGGTGAAGAGTGCTTTCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGT 116945 Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 || || ||||| || |||||||| || || || || ||||| |||||||||||||| ||| Sbjct 116946 TGTTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATC 117005 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACC 480745 || ||| || ||||| || |||| | | || || || || || || || || Sbjct 117006 TTCGCTTTCACGTTATCAATTGTGTCAGAAGACTCAA-CCTCCAGCGTGATCGTCTTGCC 117064 Query 480746 GGTGAGAGTCTTAACGAAAATTTG 480769 |||||| ||||| || || ||||| Sbjct 117065 GGTGAGCGTCTTGACAAAGATTTG 117088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268142267532428