Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq536 125 1e-23 >seq536 Length=346962 Score = 125 bits (138), Expect = 1e-23 Identities = 339/517 (66%), Gaps = 4/517 (1%) Strand=Plus/Minus Query 47863 TGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCA 47922 || ||||||||||| ||||||| | || || ||||| | || |||||| || | Sbjct 161716 TGCCCCCAGTCACGCTGTGCATCCAAGTTGCCCAGATAAAGGCATGATTGCTTCCCAAGA 161657 Query 47923 GAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGA 47982 | || | | ||||| | ||||| | |||||||| ||| ||| || || ||| Sbjct 161656 GCAATATCCGCTGCTGCTCGGGAGATCTTCCTCGTTACAAATGTTCTACCCCGCCTCGGA 161597 Query 47983 GATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTC 48042 || ||||| || ||||| || | || |||||||| ||||| | || ||||| || Sbjct 161596 CTCTCGTGATTGAACAGAATCCCGTTGCAAGCATACATCCCGTACGCCTCGCGATAATTG 161537 Query 48043 TTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGT 48102 | ||||||||| |||| || || || |||||||| || || ||||| ||||| || Sbjct 161536 ACTGTGATCCAGTACGCATAAAGCTTCGCGACACCATATGGCGAGCGTGGGTAGAAGGGA 161477 Query 48103 GTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGA 48162 || || || |||| || ||||| || || || || || || || ||||| || Sbjct 161476 GTAGTTTCGCTCTGCGGCGTCTCCACGACTTTTCCGTACAGCTCTGAAGTAGATGCCTGG 161417 Query 48163 TAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTG 48222 || | || || | ||||| || | || || || || | | |||||| Sbjct 161416 TAAAACCGTACGTGCTTTTCCAGTCCACATGTCCTGATCGCATCCAGGAGCCGCAGGGTT 161357 Query 48223 CCTATGGCATC--TGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGAC 48280 || | |||| |||| || || ||||| | ||||||||| || || || || || Sbjct 161356 CCAAGCCCATCCACGTCT--CCTGTGTACTCCGCCATCTCAAAGGACACTTTGACGTGCG 161299 Query 48281 TCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTGCTGAATAACCCTCACTAAAT 48340 ||| || || || ||||| | ||| || || ||||| |||| ||| | | Sbjct 161298 ACTGCGCGCCGAGGTTATATACCTCCGTGGGCTGCACCTGGGCGATAATGTACACGAGGT 161239 Query 48341 TTGTAGAGTCTGTTAAGTCTCCATAATGCAATTTTAA 48377 | || ||| | ||||| ||||||||||| || || Sbjct 161238 TGGTGCTGTCACTCAAGTCCCCATAATGCAACTTGAA 161202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665487237616520