Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq386 96.9 6e-15 seq329 89.7 9e-13 >seq386 Length=196871 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || || || |||| ||| || || || || || || || || | | Sbjct 173349 AATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGCTTCCCTGCGAAGATCAGACG 173290 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 |||||||||||| || |||||||| || ||||| || || | || | || |||||| Sbjct 173289 CTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGT 173230 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || || |||||||| || ||||| || || || || || || ||||| || || || || Sbjct 173229 GTCCGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGTCAGTGTTTTCACGAAGATCTG 173170 Query 193358 CAT 193360 ||| Sbjct 173169 CAT 173167 >seq329 Length=122043 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || ||||| ||||| | || | | ||| || | |||||| || || || || | | | Sbjct 116910 ATGTTATAATCGGACAGGGTGCGACCATCTTCGAGTTGTTTGCCAGCGAAGATAAGACGC 116969 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || || || || ||||| || ||||| || || | ||| | || ||| || Sbjct 116970 TGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTCGCTTTCACGTTATCAATTGTG 117029 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||||||||| || || || || || || || || ||||| || ||||| |||||| Sbjct 117030 TCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCGGTGAGCGTCTTGACAAAGATTTGC 117089 Query 193359 AT 193360 || Sbjct 117090 AT 117091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899644717469520