Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq545 107 3e-18 seq329 89.7 8e-13 >seq545 Length=209590 Score = 107 bits (118), Expect = 3e-18 Identities = 365/560 (65%), Gaps = 21/560 (4%) Strand=Plus/Minus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGAT-ATTAATTCGTTACTAAACGT 18213 ||||| || ||||||||||| | || || || | | || || | |||||| | |||| Sbjct 96963 AAACAGGCGAAATCAGTGTGCATGCCCTCGTCGC-GTATGATCAGTTCGTTTGAATACGT 96905 Query 18214 TAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAA 18273 | || ||||| | || | || || ||||| ||||| ||||||||| | || || Sbjct 96904 AAGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCGAAAGACCCCGAGAA 96845 Query 18274 GAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-----ACTGTATTT 18327 ||||||||| || || ||| || || || | | | ||| ||||| |||| || Sbjct 96844 GAATATACCTTCGACAGCA-GCAAAAGCGACCAGACGTTCTGCAAAGGAAGACTGC--TT 96788 Query 18328 ATTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTC 18387 || | | |||| | ||||| || | | ||||| |||||| |||| Sbjct 96787 ATCGGCGA---TCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGTATAGTCTC 96731 Query 18388 TATAGCATTAAACAAATCATCTTTTT-CTT-TGGAATCTTTTATATAAGTGTCGATTAAC 18445 ||||| | || | || || || ||| ||| || || ||||| || |||| | Sbjct 96730 GATAGCGTCGAAGAGATGCGCTCGTTGCTTCTGG--TCCTTGATATATGTATCGAGGAGT 96673 Query 18446 AAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTA 18505 | ||||||| |||| || || ||| | || || ||||| |||| || || | | | Sbjct 96672 AGAGAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAACAGCGA 96613 Query 18506 GCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCG 18565 || |||| || | ||| | |||||| || || | |||||| || || |||||| Sbjct 96612 GCTTCGGCGACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACGATACCG 96553 Query 18566 TCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA-- 18623 || | || ||||| || || | |||| || || | |||||||| ||| || | Sbjct 96552 TCGGAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATCATCATTTAAG 96493 Query 18624 -GATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGAT 18682 | | ||||| || | ||| | ||| || |||| ||||| | |||||||||||| Sbjct 96492 CGGTCCTTCCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCAAAAAGAT 96433 Query 18683 GATTCGGCCTGTTTGTACAT 18702 | || || | |||||||| Sbjct 96432 GCCTCTGCTTTCTTGTACAT 96413 Score = 105 bits (116), Expect = 1e-17 Identities = 360/558 (65%), Gaps = 7/558 (1%) Strand=Plus/Plus Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211 |||| || || || |||||||| | || ||||| | | || | |||||| ||| Sbjct 94639 AATAGGCAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATGAGTTCGTTCGAGAAC 94698 Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271 || || |||||||| | ||| | || || | ||| |||||||| ||||| | ||| Sbjct 94699 GTCAAGCCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAGGCGAACGAGCCGGAA 94758 Query 18272 AAGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATT 18330 ||||| || || || || ||| || || || | | | || || || || || Sbjct 94759 AAGAAGATCCCTTCGACTGCA-GCAAAGGCAACCAGACGCTCCGCGAATGAACATCCCTT 94817 Query 18331 GCTCAGTA-TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTA 18389 | |||| | |||| | ||||| || | | || || || || |||| | Sbjct 94818 G-TCAGAAATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAAGGAATTGTCTCGA 94876 Query 18390 TAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAG 18449 |||||| || | | || | || || ||| || ||||| ||||| || | || || Sbjct 94877 TAGCATCGAAGAGGTGTTCCCGCTGTTGGGGATCCTTGATATAGGTGTCAATGAGCAGAG 94936 Query 18450 AATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCT 18509 | || |||| ||||| ||| | ||||| ||||| |||| ||| || | | || | Sbjct 94937 AGTATGTTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGCTT 94996 Query 18510 CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAG 18569 | | | ||| | ||| | |||| | || || | ||||||||||| || || |||| Sbjct 94997 CCGCAGCTTGGACTTCGTTGGAAAAACGCTCGACAAGGTTCTCATTAACAATCCCATCAG 95056 Query 18570 CAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GAT 18626 | |||||||| || | || | ||||||||| || || || | | | | Sbjct 95057 AGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGTTGTCGCTCAAACGGT 95116 Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686 ||||||| || | | ||||| || | || ||||| || |||||| ||||| | || Sbjct 95117 TGTTCCAATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTGTCCAGAAAGAAGCTT 95176 Query 18687 CGGCCTGTTTGTACATTT 18704 |||| | |||||||||| Sbjct 95177 CGGCTTTCTTGTACATTT 95194 >seq329 Length=122043 Score = 89.7 bits (98), Expect = 8e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||| || || || ||||| || || || ||| ||| Sbjct 117373 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACCATTACGTTGGAGGTTGAATCTTCC 117314 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || ||||| || || || ||||| |||||||||||||| || ||| Sbjct 117313 GACACTATTGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGCATACCTCCCGATCAA 117254 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | ||||| ||||||||||| ||| | ||| | || |||||||| Sbjct 117253 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTATAAC 117194 Query 156003 AT 156004 || Sbjct 117193 AT 117192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731864123227600